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Name : PPS_4053 (PPS_4053) Accession : YP_004703474.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4576802 - 4578790 bp Length : 1989 bp Strand : - Note : - DNA sequence : ATGAATGCCGGTCTGTTTATTCCTGAGCTGGGCCATCTGGCGATGATCCTGGCGCTGTGTTTTTCCCTGGTCCAGGCCGT TGTGCCGTTGCTCGGTGCCTGGCGTGGCGACCGCTTGTGGATGAGCCTCGCCCAGCCTGCGGCATGGGGGCAGTTTGCAT TCATGCTGTTCGCGTTCGGTTGCCTGACCTATGCGTTCATGGCCGACGACTTTTCCGTGGCCTATGTTGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGCGCGGTGTGGGGCGCGCACGAAGGTTCGTTGCTGCTCTGGGCGTTGAT TCTTGCCGGCTGGACCTTCGCGGTATCGGTGTTCTCCCGACAGTTGCCGCAAGTGATGCTGGCCCGGGTGCTGGCGGTGA TGGGCATGATCAGCATCGGTTTCCTGCTGTTCCTGATCCTCACGTCAAACCCGTTCGAGCGCATCCTGCCGCAAGTGCCG ATGGACGGCCGCGACCTCAACCCGCTGCTCCAGGACATCGGCCTGATCGTCCATCCGCCGATGCTCTACATGGGCTACGT CGGCTTTTCCGTGGCCTTCGCGTTCGCCATCGCCGCGTTGCTCGGTGGTCGCCTCGACGCCGCGTGGGCGCGCTGGTCGC GGCCATGGACCATTGTCGCCTGGGCCTTCCTCGGCATCGGCATCACCCTCGGGTCGTGGTGGGCCTATTACGAACTCGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAGAACGCCTCCTTCATGCCATGGCTGGTCGGCACCGCGTTGATCCACTC CCTGGCCGTCACCGAAAAACGTGGGGTGTTCAAGAGCTGGACCGTGCTGCTGGCGATCGCGGCGTTCTCGCTGAGCCTGC TCGGGACCTTCCTGGTGCGCTCCGGCGTGCTCACCTCGGTGCATGCCTTCGCCTCGGATCCCGAGCGTGGCGTGTTCATC CTGATATTCCTGCTGTTCGTGGTCGGCGGCTCGCTGACGCTGTTCGCCCTGCGTGCACCCGTGGTGAAAAGTCAGGTCGG CTTCAACCTCTGGTCCCGGGAAACCCTTCTGCTGGGCAATAACCTGGTGCTGGTGGTGGCGGCGTCGATGATTCTCCTCG GGACGCTGTATCCACTGGTGCTTGATGCGTTGTCCGGCGCCAAGCTGTCGGTCGGCCCGCCATATTTCAACGCACTGTTC ATTCCGCTGATGGCGATTCTGATGGTGGTGATGGCGATCGGTGTGCTGGTGCGCTGGAAGGACACGCCGGTCAAATGGCT GCTGGGCATGCTCACGCCGGTGCTGCTTGGCACCGCCGCCCTGGCCGTGGTGGCGGGCATCGCTTATGGCGATTTCAATT GGGCGGTGCTGGCGACGTTCGTGCTGGCGGCGTGGGTGTTGCTGGCGGGCGTGCGGGACATCTTCGACAAGACTCGCCAT AAAGGTCTGGTCAAAGGCCTGCCGACCCTGACCCGCAGTTACTGGGGCATGCAGCTCGCCCACCTGGGGATCGCCGTCTG CGCCCTCGGTGTGGTGCTGTCCAGCCAGAACAGCGCCGAGCGCGACCTGCGCCTGGCGCCCGGCGAGTCTATGGACCTGG GCGGCTACCAATTCTTTTTCGAGGGCGCTAGGCATTTCGAAGGTCCGAACTTCACGTCCGACAAAGGCACCGTGCGGGTC ATTCGCGACGGCCGGGAGATCACCGTGCTGCACCCGGAAAAACGCCTCTACACCGTACAGAACTCGGTGATGACCGAACC CGGGATCGACGCCGGTTTCACCCGCGACCTCTACGTGGCGCTGGGCGAACCCCTCGGTGATGGCGCCTGGGCGGTACGCG TCCACGTCAAGCCGTTCGTACGCTGGATCTGGTTCGGTGGCTTGCTCACCGGCCTGGGCGGCGTCCTCGCGGCGCTGGAT CGGCGTTATCGGGTCAAAGTGAAAACCCGGGTGCGCGAAGCCCTGGGCGTGACGGGAGCCACTGCATGA Protein sequence : MNAGLFIPELGHLAMILALCFSLVQAVVPLLGAWRGDRLWMSLAQPAAWGQFAFMLFAFGCLTYAFMADDFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILAGWTFAVSVFSRQLPQVMLARVLAVMGMISIGFLLFLILTSNPFERILPQVP MDGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALF IPLMAILMVVMAIGVLVRWKDTPVKWLLGMLTPVLLGTAALAVVAGIAYGDFNWAVLATFVLAAWVLLAGVRDIFDKTRH KGLVKGLPTLTRSYWGMQLAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLGGYQFFFEGARHFEGPNFTSDKGTVRV IRDGREITVLHPEKRLYTVQNSVMTEPGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGLGGVLAALD RRYRVKVKTRVREALGVTGATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-136 | 59 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-122 | 55 |
