Gene Information

Name : PPS_4056 (PPS_4056)
Accession : YP_004703477.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 4579425 - 4580192 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATAGCAATGATCTGGACCTGGTTTCATAAGCTCGGCTCACCCAAGTGGTTCTACGGCATCAGCGGCAGACTGTT
GCCCTGGCTGAGCGTCGCGGCCCTGTTGCTGATCGGCATCGGCCTGGTCTGGGGCCTGGCTTTCGCGCCGCCGGACTATC
AGCAGGGCAACAGTTTTCGCATCATCTATATCCATGTCCCCGCGGCGATGCTGGCCCAGTCGGTCTACGTGATGCTGGCG
ATCTGCGGTGTGGTCGGCCTGGTGTGGAAGATGAAACTGGCCGATATCGCCCTGCAATGCGCAGCGCCCATCGGTGCCTG
GATGACCGCCGTGGCGCTGGTCACCGGGGCGATTTGGGGCAAGCCGACCTGGGGTTCGTGGTGGGTCTGGGACGCACGAC
TGACGTCGATGCTGATCCTGCTGTTCCTGTACTTCGGTCTTATTGCGTTGGGCAACGCCATCAGCAATCGTGACAGCGCC
GCCAAGGCCTGCGCGGTATTGGCGATTGTCGGCGTGATCAACATCCCGATCATCAAGTATTCGGTGCAATGGTGGAACAC
CCTGCACCAGGGCGCGACCTTCACCCTCACCGAAAAACCGGCGATGCCGGTCGAGATGTGGCTGCCGCTGCTACTGACCG
TGTTGGGTTTCTACTGCTTCTTCGGCGCAGTGCTGCTGCTGCGCATGCGCCTCGAAGTGCTCAAGCGCGAAGCCCGGGCC
AGCTGGGTGAAAGCCGAAGTACAGAACAGCCTGGAGGCCGCTCGATGA

Protein sequence :
MEIAMIWTWFHKLGSPKWFYGISGRLLPWLSVAALLLIGIGLVWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSVYVMLA
ICGVVGLVWKMKLADIALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGLIALGNAISNRDSA
AKACAVLAIVGVINIPIIKYSVQWWNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARA
SWVKAEVQNSLEAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 8e-39 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPS_4056 YP_004703477.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 1e-41 50