Gene Information

Name : cspD (TPPCIT_087)
Accession : YP_004707012.1
Strain : Candidatus Tremblaya princeps PCIT
Genome accession: NC_015736
Putative virulence/resistance : Unknown
Product : putative cold shock transcription regulator protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 81413 - 81619 bp
Length : 207 bp
Strand : +
Note : predicted based on similarity to TIGRFAM cspD and related proteins in nr

DNA sequence :
ATGGCCACAGGCACAGTTAAGTGGTTCAACGACGCTAAAGGTTTCGGATTCATCACGCCAGACGAAGGCGGTGAGGATCT
GTTTGCTCACTTCTCGGCCATTAACGTTCAGGGGTTCAAGACACTCAAGGAGGGACAGAAGGTGTCGTTCGACGTTATAC
AGGGACCAAAGGGCAAGCAGGCGTCAAACATTCAGGCCAGGGAGTAG

Protein sequence :
MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAINVQGFKTLKEGQKVSFDVIQGPKGKQASNIQARE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 59