Gene Information

Name : CXIVA_00260 (CXIVA_00260)
Accession : YP_004707095.1
Strain : Clostridium sp. SY8519
Genome accession: NC_015737
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 25258 - 27852 bp
Length : 2595 bp
Strand : -
Note : -

DNA sequence :
ATGAATATACAGAAATTTACACAGAAATCCATGCAGGCGATTCAGGCTTCTGAAAAGCTTGCCTATGACTATGGAAATCA
GGAGATCGAGCAGGAACATCTGCTGGTGGCTTTGCTGCAGCAGGAAGACGGCTTAATCCCGAAACTGATTGAGAAAATGG
AGATTAACCGGAACCAGTTCGAAGACGAAGCAGTGGCAGCTTTGGAAAAGCGGACCAAGGTTTCCGGCGGACAGGTGTTT
GTGGGCCAGCAGCTGAACAAGGTGCTGATTGAGGCAGAAGACGAAGCGAAAGCGATGGGAGACGAATATGTATCCGTGGA
ACATCTGTTTTTGTGCATGATCCGTTACCCGAATCCGGCCATCAAAGAGCTGTTCCGGACCTATGGCATCACAAGAGAGC
GGTTCCTGACCGTTCTGTCCACCGTGCGGGGCAACCAGAAGGTAACTTCGGACAATCCGGAAGCTACTTATGATACGCTG
GAAAAATACGGCTATGATATGGTACAGCGTGCCCGGGACCAGAAGATGGATCCGGTGATCGGACGTGACAGTGAGATCCG
GAATGTGATCCGTATTCTGTCCCGTAAAACAAAAAACAATCCGGTGCTGATCGGCGAACCCGGCGTCGGCAAAACAGCCG
TTGTAGAGGGACTGGCTCAGCGGATTGTCCGCGGCGACGTACCAGAGGGACTGAAAAACAAAAAACTGTTTGCGCTGGAT
ATGGGCGCCCTGATTGCGGGAGCAAAATACCGGGGCGAATTTGAAGAACGTCTGAAAGCGGTCCTGGATGAAGTGCGCAA
GAGTGAAGGCGAGATCATCCTGTTTATTGATGAGCTGCATACGATTGTGGGAGCCGGCAAGACAGACGGCGCCATGGATG
CGGGCAATATGCTCAAACCGATGCTTGCCCGCGGGGAACTCCACTGCATCGGCGCCACCACACTGGATGAATACCGGGAA
TATGTGGAAAAGGACGCCGCGCTGGAGCGGCGGTTCCAGCCGGTTATGGTAGATGAACCGACGGTGGAGGATACCATCTC
GATTCTTCGTGGCCTGAAAGAACGGTATGAAGTATTCCATGGCGTGAAGATTACAGACGGCGCGCTGGTTGCGGCGGCTG
TTTTGTCCAATCGGTACATTTCAGACCGGTTCCTGCCGGATAAGGCCATTGACCTTGTGGATGAGGCATGTGCGCTGATT
AAGACAGAACTGGATTCCATGCCCACAGAACTGGACGAATTAAACCGGAAGATCATGCAGCTGCAGATCGAGGAAACCGC
ACTGAAAAAAGAGACCGATCAGCTGTCCAAAGACCGGCTGGCCACTCTGCAGAAAGAACTGGCAGAATATCAGTCCGAGT
TTGCCTCCAAGAAGGCACAGTGGGACAATGAAAAAGCTGATGTGGAAAAAGTACAGAAACTGAGAGAAGAGCTGGAAGGC
CTGAACAAGGAAATCGAGCTGGCGCAGCGTAATTATGACCTGAACAAGGCAGCAGAGCTTCAGTACGGCAGAAAACCGCA
GCTGGAGAAAGAGCTGGAAGCAGAGGAAGAGAAAGTAAAGAACCGTGACATGTCTCTGGTTCATCAGAATGTCAGCGAGG
ATGAGATCGCGAGAATTATTTCCCGCTGGACCGGTATCCCGGTGGCGAAACTGACCGAGAGTGAACGGAACAAAACCCTG
CATCTGGATGAAGAACTGCACAAACGGGTCATCGGCCAGGATGATGCGGTGACCAAAGTGACCGAGGCCATTATCCGTTC
CAAAGCCGGAATCAAAGATCCGACCAAACCGATCGGTTCCTTCCTGTTCCTTGGCCCTACCGGTGTAGGTAAGACAGAGC
TGGCCAAGGCGCTGGCGGCTAATCTGTTCGATGATGAAAACAACATGGTGCGTCTGGATATGACGGAATATATGGAGAAG
TTCTCGGTATCCCGTCTGATCGGAGCGCCTCCGGGATATGTCGGCTACGATGAAGGCGGTCAGCTGACCGAGGCAGTCCG
CAGAAAACCGTATTCGGTGGTTCTGTTTGATGAGGTGGAAAAAGCCCATCCGGATGTATTCAACGTCCTGCTTCAGGTAC
TGGATGACGGCCGGATCACAGATTCTCAGGGCAGAACCGTGGACTTTAAGAACACGATTATCATCATGACCTCCAACCTG
GGTTCACAGCATCTGCTGGAAGGCATTGATGCCAACGGCAATATCAATCCGGAAGCAGAGGCAAGGGTAATGAACGAACT
GAAAGGCAATTTCCGTCCGGAATTCCTGAACCGTCTGGATGAGATTATCATGTTCAAACCGCTGACCAAGGAAAACATCG
CCGGTATCGTGGATCTGCTGATGGCAGACCTGAACAAACGGCTGGTTGACCGGGAGATCACAGTAGAACTGACCCCGGCA
GCAAAGGCTTATATTACAGACCATGGCTATGATCCCATGTATGGCGCGCGTCCGCTGAAACGGTATCTGCAGAAACATGT
GGAAACCCTTTCCGCGAAACTGATCCTTGCGGATCAGGTACGGGCAAGAGATACCATACTGATTGACACGGAAAATGATG
AACTGACGGCCAAAGTGAAAGAACCGGCGGCCTGA

Protein sequence :
MNIQKFTQKSMQAIQASEKLAYDYGNQEIEQEHLLVALLQQEDGLIPKLIEKMEINRNQFEDEAVAALEKRTKVSGGQVF
VGQQLNKVLIEAEDEAKAMGDEYVSVEHLFLCMIRYPNPAIKELFRTYGITRERFLTVLSTVRGNQKVTSDNPEATYDTL
EKYGYDMVQRARDQKMDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKNKKLFALD
MGALIAGAKYRGEFEERLKAVLDEVRKSEGEIILFIDELHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRE
YVEKDAALERRFQPVMVDEPTVEDTISILRGLKERYEVFHGVKITDGALVAAAVLSNRYISDRFLPDKAIDLVDEACALI
KTELDSMPTELDELNRKIMQLQIEETALKKETDQLSKDRLATLQKELAEYQSEFASKKAQWDNEKADVEKVQKLREELEG
LNKEIELAQRNYDLNKAAELQYGRKPQLEKELEAEEEKVKNRDMSLVHQNVSEDEIARIISRWTGIPVAKLTESERNKTL
HLDEELHKRVIGQDDAVTKVTEAIIRSKAGIKDPTKPIGSFLFLGPTGVGKTELAKALAANLFDDENNMVRLDMTEYMEK
FSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIIIMTSNL
GSQHLLEGIDANGNINPEAEARVMNELKGNFRPEFLNRLDEIIMFKPLTKENIAGIVDLLMADLNKRLVDREITVELTPA
AKAYITDHGYDPMYGARPLKRYLQKHVETLSAKLILADQVRARDTILIDTENDELTAKVKEPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-102 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-102 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CXIVA_00260 YP_004707095.1 hypothetical protein VFG2076 Protein 8e-115 43
CXIVA_00260 YP_004707095.1 hypothetical protein VFG2084 Protein 6e-115 42