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Name : ccmF (PSTAB_2532) Accession : YP_004714902.1 Strain : Pseudomonas stutzeri ATCC 17588 Genome accession: NC_015740 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2729833 - 2731806 bp Length : 1974 bp Strand : - Note : - DNA sequence : ATGATTCCGGAGCTCGGCCATCTGGCAATGATTCTGGCCCTGTGCCTGGCCGTGGTCCAGGCCACGCTGCCGCTGATCGG TGCCTGGCGCGGTGACCGGCAATGGATGGGCCTGGCGCAGCCGGCGGCCTGGGGGCAGTTCGCGTTTCTCGGTTTCTCCT TTGCCTGCCTGACCTACGCCTTCATGGTCGACGATTTCTCCGTCGCCTATGTGGCGCACAACTCCAACAGCGCCTTGCCC TGGTACTACAAGTTCAGTGCCGTGTGGGGTGCCCACGAAGGTTCGCTGCTGCTGTGGGCCTTCATTCTCGCCGGCTGGAC CTTCGCGGTGGCGATCTTCTCCCGTCAGCTGCCGGAAGACATGTTGGCGCGCGTGCTCGGTGTGATGGGCCTGATCAGTA TCGGTTTCCTGCTGTTCCTGATCGTCACCTCCAATCCGTTCGAGCGGTTGCTGCCGCAGGTGCCGATGGATGGCCGGGAC CTCAACCCGCTTCTGCAGGACTTCGGTCTGATCGTGCATCCCCCGATGCTCTACATGGGGTACGTCGGTTTCTCGGTTGC CTTCGCCTTCGCTATCGCCGCGCTGCTCGGCGGGCGTCTTGATGCCGCCTGGGCGCGCTGGTCCCGTCCATGGACGCTGG TGGCCTGGGCGTTCCTCGGTCTGGGCATCGCGCTGGGTTCCTGGTGGGCCTATTACGAGCTCGGCTGGGGTGGCTGGTGG TTCTGGGACCCGGTGGAAAATGCCTCGTTCATGCCCTGGCTGGTCGGTACCGCGTTGATCCACTCGCTGGCCGTTACGGA GAAGCGCGGCGTCTTCAAGAGCTGGACGGTGCTGCTGGCGATCGCGGCCTTCTCGTTGAGCCTGCTCGGCACCTTCCTCG TCCGCTCCGGTGTACTCACTTCCGTTCACGCCTTCGCTACCGATCCCGAGCGCGGCGTGTTCATCCTGGTGTTCCTGCTG ATGGTGGTCGGTGGCTCGCTGACCCTGTTCGCCCTGCGCGCGCCGGTGGTCAAGAGTCAGGTCGGCTTCGGCCTCTGGTC GCGCGAAACCCTGCTGCTGGTCAATAACCTGCTGCTCGTCGTGGCGACCGCGATGATCCTGCTGGGTACGCTGTATCCGC TGCTGCTGGATGCCCTGTCTGGTGCCAAGCTGTCGGTGGGGCCGCCGTACTTCAATGCCATGTTCGTGCCGTTGATGGCC GCGCTGATGCTTACGCTGGGTGTCGGGATCATGGTGCGCTGGAAGGACACGCCGGTGAAGTGGTTGCTCGGCATGCTCAC GCCGGTGCTGATCACCAGCGTGGTACTCGGCGGGCTCGGCTCGCTGCTGTTCGGTGACTTCAACTGGGCCGTGCTGGCGG TATCCCTGCTGGCGGCATGGGTGGTTATCGCCAGCGTCCGCGATCTGCTCGACAAGACCCGTCACAAGGGCCTGTTGAAG GGGGCACGGAGCCTTGCACCGAGTTATTGGGGCATGCACCTGGCGCACCTGGGCCTCGCTGTCTGTGCGATCGGTGTGGT GTTGACCAGCCATCAGAGCTCCGAGCGTGACCTGCGCCTGGCGCCGGGCGAGTCGCTGTCGCTGGGTGGCTACGAGTTCG TCTTCGAGGGGGCGGTGCACCACGAGGGGCCGAACTTCACCTCGGACAAGGCCACCATCCGGGTTTTCGACGGTGACAAG CAGATCGCCACCCTGCATCCGGAGAAGCGCCTGTACACCGTGCAGCAGATGCCGATGACCGAGGCGGGCATCGACGCCGG CTTCACTCGCGACCTCTATGTGGCCCTCGGCGAGCCGCTGGGCGACGGTGCCTGGGCAGTGCGCGTGCATATCAAGCCGT TCGTGCGCTGGATCTGGTTGGGTGCGCTGATGATGGGCCTGGGCGGTGCCCTGGCCGCCAGTGATCGTCGTTATCGTGTC AAGGTAAAGACCCGCGTGCGCGAAGCATTGGGTATGGCGGCGCAAGGAGCCTGA Protein sequence : MIPELGHLAMILALCLAVVQATLPLIGAWRGDRQWMGLAQPAAWGQFAFLGFSFACLTYAFMVDDFSVAYVAHNSNSALP WYYKFSAVWGAHEGSLLLWAFILAGWTFAVAIFSRQLPEDMLARVLGVMGLISIGFLLFLIVTSNPFERLLPQVPMDGRD LNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGLGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFATDPERGVFILVFLL MVVGGSLTLFALRAPVVKSQVGFGLWSRETLLLVNNLLLVVATAMILLGTLYPLLLDALSGAKLSVGPPYFNAMFVPLMA ALMLTLGVGIMVRWKDTPVKWLLGMLTPVLITSVVLGGLGSLLFGDFNWAVLAVSLLAAWVVIASVRDLLDKTRHKGLLK GARSLAPSYWGMHLAHLGLAVCAIGVVLTSHQSSERDLRLAPGESLSLGGYEFVFEGAVHHEGPNFTSDKATIRVFDGDK QIATLHPEKRLYTVQQMPMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHIKPFVRWIWLGALMMGLGGALAASDRRYRV KVKTRVREALGMAAQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-132 | 59 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-120 | 56 |
