Gene Information

Name : PSTAB_4161 (PSTAB_4161)
Accession : YP_004716531.1
Strain : Pseudomonas stutzeri ATCC 17588
Genome accession: NC_015740
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4489209 - 4489709 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGG
CTGTAGTCAACGTGCGGCCGACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAAGACGACGACATGGCCGCGATCC
GCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGTCTGTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCC
TATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCGCTGATCGTCGAAACCCTGCT
GCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCATGGCATGACCT
ACGCGGCTATCGCCACCGAACTGGGTGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTG
ATGCTGGTAGCGGAGGACTGA

Protein sequence : 
MLRQQMLHRFYADHHGWLNGWLRRQLGCSQRAADLAQDTFVRVLSKDDDMAAIREPRAYLHTIAKGLLINHWRRRQIEQA
YLDALALQPEPVAPSPESQALIVETLLRIDAMLAQLPTRVRSAFLMSQLHGMTYAAIATELGVSERMVKKYMAQAMLHCL
MLVAED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-34 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAB_4161 YP_004716531.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 5e-35 49