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Name : SBG_1244 (SBG_1244) Accession : YP_004730114.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : type VI secretion protein ClpV Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1363185 - 1365698 bp Length : 2514 bp Strand : + Note : - DNA sequence : ATGGATTTAAAAATACTGGTACAAAAACTTAATCCGGTTTGTTTACGCGCCCTGGAGCAGGCAGCAGAACGCAGCCGGGC GCAGGGCCACTGGTTCGTGGAGCCGGAACATTTGTTACTGGCGCTACTGGATGATGAGCATTGTGATTTCGTTTGCTGTC TTAACGGCGCAGCGATCCCGGTTGACGCTCTGCGCGATGAGATCCTGCGCGCGCAGGGACAGTTCAAAACAGGCTGTACG CGGATGCCGGTATTTTCTTTGCAACTGGTTGAGTTGCTGGAGGGTGCCATTTTACAGGCGACCTTTCAGAATCATACCGA GGTACGTTCCGCGCTGGTATTGTTGGCATTACTGACTCGTGACCGCCTGCGCGTCCAGCTGGCGCAGGGAATGCCGCTGC TGTTGAAAATTCCCACTGAGATGCTGGAGAACCAATGGCGAGAGTGGTGCCGGGGAGCGGCGGAAGATGCGGCAAAACCG GTAAAAGGCGAAACCCCACGGCATAGTGGCGGCGTGCTTGAACAATACACCCACGATCTGACTCATGATGCGCGGGAAGG GCGGATCGACCCGATCATCGGGCGCGATGCGGAGATCCGCCAGTGTATCGACATCCTGCTGCGTCGCAGGCAGAACAACC CGATTCTGGTCGGTGCGCCAGGCGTGGGGAAAACCGCCGTCGCTGAAGGGCTGGCGCTGCGCATCGCCGAAGGCAAGGTA CCGCCTCCCCTGCGCGAGGTGGTGTTACTTTCGCTCGATCTTGGCCTATTGCAGGCAGGCGCTGGTGTGAAAGGCGAGTT TGAACAGCGTTTGCGCGGCGTGATCGAGGCGGTAAAAACATCCCCGCAGCCGATTATTCTGTTTATCGACGAGGCCCATA CGCTGATTGGCGCGGGCGGCGCCGAAGGCGGCAGCGACGCCGCCAACCTGCTGAAACCGGCGCTGGCGCGCGGCGAACTG CGTACCATCGCCGCCACTACCTGGCAGGAGTATAAAAAGTATTTCGAGAAGGATCCGGCGCTGGACCGCCGTTTTCAGCG TATCCAGATTGAAGAGCCGGACGAGAACGGTGCGGTGGTGATGCTGCGGGCGGTGGCCGATAAACTGGAGGCGCATCACG GCGTGCAAATTCTGGATACCGCCATCCGCGAGGCGGTGCGCCTCTCGCAGCGCTATATCTCTGGTCGCCAGTTGCCGGAC AAAGCAATCAGCGTGCTCGATACCGCCTGCGCGCGGGTGGCGCTGGCGCAGCATGACGTGCCGCCCCAGCTGGAGGAGAT CCGCCAGCATCTGGCGGCCATCGAGGAAGAGAGCGCGCGCCTGAACCGCGAACTGCTGGTGGGCGTCGATCATCACGACC GGCTGTGCGACCTGGCGGCGCAGGCGGAAAAACTCCACCAGCAGGCGCGGGAGGTGGAGGAGCGCTGGCAGGATGAGCGC CAGCGGGTCGGCGAGCTGCAGGCCGCCCGTCAGCGGATGCTGGATCTCAGCGTGCGGCTGGAAGAAGACGATGAACTGGA AGAGGAGCTGGTGGAGTGCGCGGCGCTGATTGGCAAACTGGAAACCGCCGCCGCCCAGCTACGTGAAGAAGTGCCGCTGG TGCCGGACTGCGTCGATCCCGCCACCGTGGCTTCGGTGATCAGCGGCTGGACCGGGATCCCGATAGGCCAGATGCAGACC GATGAAGCCCACGCTCTGCGCACCCTGGTAGACCGGATGAGCGAGCGTGTGATGGGGCAGCAGATGGCGCTGGAGACTAT CGCCCAGCGCCTGCGCGCCTACCGCAGCGGCCTGACCGATCCGCAAAAGCCGGTCGGCGTGTTCCTGCTGGTGGGGCCAA CCGGTGTGGGCAAAACCGAAACTGCCTATGCGCTGGCCGACGCCCTCTACGGCGGCGAACGCAATCTGATCACCATCAAC CTGTCTGAATATCAGGAGGCGCACACCGTCAGCCAGCTTAAAGGCGCGCCGCCGGGCTACGTTGGCTATGGTAGCGGCGG GGCGTTAACCGAAGCGGTGCGCCGTCGGCCTTATTCGGTGGTGCTGCTCGACGAAATCGAAAAGGCACACCCGGACGTAC TGGAGGCGTTTTATAACGTTTTCGACAAAGGGGTAATGGAAGACGGCACCGGGCTGATTGTCGATTTCAAAAATACGGTG ATGCTGGCGACCAGCAACGTCGGCGCGGAATTAATTCTGGAAACGCCGGCGGCTGAATTAAATAGCGAGCAGTTTAACGA GGCGCTGCGTGAGGAACTGCTGCGTCATTTCCGCCCGGCGTTTTTAGCGCGGATGACCACGGTGGCCTATCGCGCACTGG ATGAGGAGATATTAAAAGGAATTGTGCTGGCGAAACTGGAGAAATTAGCACAGCGGTATTTTGTGGCGACGGGGGAGAAG TTGAATATTATAAATAATATAGCTTTAGATTTATCATTTTTTTCCAGGGCAGGGGATGTGAGAAATATAGAAAATACGCT TATAAATAAAATCCTTGAAAAAAATAGAATTTAA Protein sequence : MDLKILVQKLNPVCLRALEQAAERSRAQGHWFVEPEHLLLALLDDEHCDFVCCLNGAAIPVDALRDEILRAQGQFKTGCT RMPVFSLQLVELLEGAILQATFQNHTEVRSALVLLALLTRDRLRVQLAQGMPLLLKIPTEMLENQWREWCRGAAEDAAKP VKGETPRHSGGVLEQYTHDLTHDAREGRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGKV PPPLREVVLLSLDLGLLQAGAGVKGEFEQRLRGVIEAVKTSPQPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGEL RTIAATTWQEYKKYFEKDPALDRRFQRIQIEEPDENGAVVMLRAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPD KAISVLDTACARVALAQHDVPPQLEEIRQHLAAIEEESARLNRELLVGVDHHDRLCDLAAQAEKLHQQAREVEERWQDER QRVGELQAARQRMLDLSVRLEEDDELEEELVECAALIGKLETAAAQLREEVPLVPDCVDPATVASVISGWTGIPIGQMQT DEAHALRTLVDRMSERVMGQQMALETIAQRLRAYRSGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITIN LSEYQEAHTVSQLKGAPPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNTV MLATSNVGAELILETPAAELNSEQFNEALREELLRHFRPAFLARMTTVAYRALDEEILKGIVLAKLEKLAQRYFVATGEK LNIINNIALDLSFFSRAGDVRNIENTLINKILEKNRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-126 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SBG_1244 | YP_004730114.1 | type VI secretion protein ClpV | VFG2084 | Protein | 1e-114 | 49 |
| SBG_1244 | YP_004730114.1 | type VI secretion protein ClpV | VFG2076 | Protein | 5e-146 | 47 |
