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Name : ccmH2 (SBG_2045) Accession : YP_004730878.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein H2 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4235 EC number : - Position : 2230146 - 2231168 bp Length : 1023 bp Strand : - Note : that this CDS is almost identical to SBG3374 99% identity in 340 aa overlap DNA sequence : GTGCTGATGCTGGTTATCTCCGGGTCAGCGCTGGCAACCATCGACGTGATGCCGTTTAAAGACGAGGCGCAGGAGCAGCA GTTCCGCCAGCTCACGGAGCAGCTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCGGACTCTGATTCCATGATTGCGA CCGACCTGCGGCAAAAAGTCTATGAACTGATGCAGGAAGGCAGGAGCAGGCAGGAAATTGTCGATTATATGGTGGCCCGC TACGGCAACTTCATTACTTATGATCCGCCATTAACTCCGCTGACTGTTCTGTTATGGGTATTGCCACTGGTGGCGACGGG CGCTGGCGGCTGGGTGATTTTCGCCCGGACGCGACGCCGGGTACGTATCCGGCAGGACGTCTTTGCCGGCGGCATTCCTG CGGCGGGACCACGCGCAGGCGTGGGGATGTATCTTCCGGGCGTGGTTATCGCGCTGGGGGTGGCCGCCACCAGTTACTCC CTGACCGGCAGCTATCAGCAGGTCAGGAACTGGCAGCAGGCAACGGCGCAGACGCCGGGGCTGCTGGCGCGGGCGCTGGA CCCGCAGGCGCAGCCGCTGGATGAAGAGGAGATGGCGCGGCTGGCGCTGGGGCTGCGGACCCGCCTGCAAAAGGATGCCG GCAACGTTGAGGGCTGGCTCATGCTGGGGCGCACCGGTATGGTACTGGGTAATGCCAGTACCGCCACAGAGGCTTATGCG AACGCCTACCGCCTGGATCCGAAAAACAGCGATGCGGCGTCAGGCTATGCTGAAGCCCTGACGCGGTCGTCCGACCCGGA GGATAACCGGCGCGGCGGGGAGTTGCTGCGCCAGCTGGTGAGAAGTGACCACGCCAGCGTGCGGGTGTTAAGCCTGTATG CATTTAACGCCTTTGAGCAGCAGCGCTTTGGCGAGGCGGTGGCGGCCTGGAAGATGATGCTGAAACTGCTGCCGGCAGGC GATACCCGGCGCGCGGTGATTGAGCGCAGTATCCGGCAGGCGATGGCGCAGCAGGGCAGGTAA Protein sequence : MLMLVISGSALATIDVMPFKDEAQEQQFRQLTEQLRCPKCQNNSIADSDSMIATDLRQKVYELMQEGRSRQEIVDYMVAR YGNFITYDPPLTPLTVLLWVLPLVATGAGGWVIFARTRRRVRIRQDVFAGGIPAAGPRAGVGMYLPGVVIALGVAATSYS LTGSYQQVRNWQQATAQTPGLLARALDPQAQPLDEEEMARLALGLRTRLQKDAGNVEGWLMLGRTGMVLGNASTATEAYA NAYRLDPKNSDAASGYAEALTRSSDPEDNRRGGELLRQLVRSDHASVRVLSLYAFNAFEQQRFGEAVAAWKMMLKLLPAG DTRRAVIERSIRQAMAQQGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmH | YP_217239.1 | heme lyase subunit, cytochrome c-type biogenesis | Not tested | SPI-12 | Protein | 6e-111 | 84 |
