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Name : secD (SBG_0363) Accession : YP_004729273.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 422470 - 424317 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGGTCGCCGTGATTGTCGTCGGCCTGCTTTACGCACTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACGTTACAAGAAGAAAAAATTCCCGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACTGATACCCAGTTGCGCGCCCGTGAAGCTCTGATGAGCGTGCTGGGTGACAAATATGTCGTGGCGCTTAACCTTGCGCC GGCAACGCCGCGCTGGTTGGCGGCTATTCATGCTGATCCAATGAAGCTGGGCCTTGATTTGCGCGGCGGCGTTCACTTCC TGATGGAAGTGGATATGGATACCGCGCTGGGTAAACTCCAGGAACAAAATATTGACAGCCTGCGCAGCGATCTGCGTGAA AAAGGCATTCCTTATACGACCGTTCGTAAACAAGATAATTACGGGCTGAGCATCACGTTCCGTGACGGCAAAGCGCGTGA TGAAGCGATAGCGTATCTGACACCACGCCATCGTGATTTGGTGATTTCCAGCCAGGGCGACAATGCGCTTCGTGCGGTAA TGACCGATGCGCGACTGAGCGAAGCACGGGAATACGCCGTTCAGCAGAACATTAATATCCTGCGTAACCGTGTTAACCAA CTGGGTGTGGCGGAGCCTGTCGTACAACGTCAGGGCGCTGACCGCATTGTGGTTGAGTTGCCAGGCATTCAGGATACCGC ACGTGCGAAAGAAATTTTGGGTGCTACTGCCACGCTGGAATTCCGTCTGGTGAATACCAATGTTGACCAGGCCGCAGCCG CCTCCGGGCGCGTTCCGGGCGACTCCGAAGTGAAACAGACACGTGAAGGACAGCCGGTTGTGCTGTACAAGCGCGTGATC CTGACCGGCGATCATATCACCGACTCCACTTCCAGCCAGGACGAATATAACCAGCCGCAGGTTAACATCTCGCTGGATAG CGCGGGTGGTAACATCATGTCCAACTTCACCAAAGACAACATTGGCAAGCCGATGGCGACCTTGTTCGTGGAGTATAAAG ACAGCGGCAAGAAAGATGCTAACGGTCGCGCTGTACTGGTGAAACAGGAAGAGGTGATTAACATCGCCAATATTCAGTCT CGTCTGGGTAACAGCTTCCGTATTACCGGTATTAGCAATCCGAATGAAGCGCGTCAGTTATCGCTGTTGCTGCGTGCCGG CGCGCTGATTGCGCCGATTCAGATCGTTGAAGAGCGCACCATTGGCCCAACGCTTGGGATGCAAAACATCAAGCAGGGGC TGGAAGCGTGTCTGGCCGGTCTGGTGGTCTCTATCCTGTTCATGATCTTCTTCTATAAGAAGTTCGGTTTGATTGCGACC AGTGCCCTCGTCGCCAACCTGGTGTTGATTGTCGGTATTATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCAGGTAT CGCGGGGATTGTCTTAACCCTTGCGGTCGCGGTCGACGCCAACGTTCTGATTAATGAGCGTATCAAAGAAGAGTTGAGCA ATGGCCGCACAGTACAGCAGGCTATTGATGAAGGCTATAAGGGCGCGTTTAGTTCCATCTTCGATGCGAACATCACGACA CTGATTAAAGTCATCATTCTGTATGCCGTTGGTACCGGGGCTATTAAAGGGTTCGCGATCACAACCGGTATCGGTGTGGC GACGTCGATGTTCACTGCGATTATCGGTACGCGTGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGT CAATCTGA Protein sequence : MLNRYPLWKYIMLVAVIVVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDT TDTQLRAREALMSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKQDNYGLSITFRDGKARDEAIAYLTPRHRDLVISSQGDNALRAVMTDARLSEAREYAVQQNINILRNRVNQ LGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIAT SALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYKGAFSSIFDANITT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-126 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-126 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-126 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-125 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 49 |
