Gene Information

Name : Ccan_05550 (Ccan_05550)
Accession : YP_004739782.1
Strain : Capnocytophaga canimorsus Cc5
Genome accession: NC_015846
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.31
Position : 606438 - 607097 bp
Length : 660 bp
Strand : -
Note : Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540); ABC transporter, lipoprotein release, LolD (PS51244); ATP BINDING CASSETE (ABC) TRANSPORTER (PTHR19222); ABC transporter-like (PS50893); ATPase,

DNA sequence :
ATGATAAAAGCGAAAAATATACACAAAACCTACGGAGGATTAGAAGTTCTCAAAGGGGTAGATATTGAAGTAAAAAAAGG
TGAGGTTATTTCAATCGTAGGTGCTTCTGGAGCAGGAAAAACTACACTTTTGCAAATTCTCGGTACTCTTGAGGCGATGA
ATCCATTACCCGATGCTACTCTTTTTATAAACAATGTAGATATTAAATCGTTGTCTTCTAATAAATTGGCAAAATTCCGT
AATGAACATATTGGATTTATTTTTCAATTTCATCAATTATTGCCTGAATTTACGGCTTTGGAAAATATTTGCATTCCTGC
ATATATCAAAGGAATTTCTAAAAAAGAAGCCGAAAATCGAGCTATGGAATTGTTATCCTTTTTGAATCTTACTCAACGTG
CAGGGCATAAACCTGAAGCACTCTCAGGTGGAGAGCAACAGCGTGTGGCTGTGGCACGTGCTTTGATGAATCGTCCAGCA
GTGGTTTTTGCCGATGAACCTAGTGGTAATTTGGATTCGGAAAGTGCTGAAAACCTGCATCAGCTTTTTTTCGAATTGCG
AAAAACCTTTGGGCAAACTTTCGTAATTGTAACTCATAATGAAGATTTAGCCAATATGGCAGACAGAAAGCTCACAATGT
CTGACGGTAAGTTTCTGTAA

Protein sequence :
MIKAKNIHKTYGGLEVLKGVDIEVKKGEVISIVGASGAGKTTLLQILGTLEAMNPLPDATLFINNVDIKSLSSNKLAKFR
NEHIGFIFQFHQLLPEFTALENICIPAYIKGISKKEAENRAMELLSFLNLTQRAGHKPEALSGGEQQRVAVARALMNRPA
VVFADEPSGNLDSESAENLHQLFFELRKTFGQTFVIVTHNEDLANMADRKLTMSDGKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccan_05550 YP_004739782.1 lipoprotein-releasing system ATP-binding protein lolD CP001581.1.gene798.p Protein 1e-34 41