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Name : Atc_2412 (Atc_2412) Accession : YP_004749762.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : glycolate dehydrogenase, iron-sulfur subunit GlcF Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2466212 - 2467465 bp Length : 1254 bp Strand : - Note : - DNA sequence : ATGCAAACCCAGATTGCTCCCCAATACCGCGCCGACCCCTTGGTCGGCGAAGCCGAGTCCATCCTTCGGGATTGTGTGCA TTGCGGTTTTTGCAATGCGACTTGTCCCACCTACCGCATCCTTGGCGACGAACAGGACGGCCCGCGCGGGCGCATCTACC TCATCAAGGCCCTGCTGGCAGGGGAGCAGACGACGGAGACGACCCGCCTGCACCTGGATCGCTGCCTCGGCTGTCGCGCC TGTGAGACCACCTGCCCTTCGGGCGTGCGCTACGGTCGCCTTCTGGAGATCGGCCGCCACCTACAGAACCAAGCGTTGCC GCGTCCGCCGCGGGCGGCCCTCGAGCGTCGTCTGCTTCGCTACGTGGTCACCGAGCCCAAGCGCTTTCGCGCTGCCCTTG GCCTTGGTCGGGTGTTCAAACCCCTGCTGAAGGCATCACTGGCGCGCACTTTGCCACCCCTTCCGGCAGAATCGCCGGAC TCTGCACGGTCGGAAGTTGCCGTTGCGTCCTCCGCCGGCCGGCGCGTGCTGCATCTGGACGGCTGCGTTCAAAGCGTGGC AACGCCTGCCACCCGCGCCGCCCTGGCGCGGATACTGCAACGCCTGGGTGTGGACTTGAGGTCTGCCCCTACGGCGACGT GCTGTGGAGCGCTGAGTCTGCACCTGGACGCCTGGGATGAGGCCAGGGCCCTCATGCGGGGCAATATCGATGCCTGGTGG CCGTATCTCGAGGACGGTGCCCAGGCCATTCTCGTGAGCGCCAGTGGCTGCGGCAGTGTGGTCAAGGACTATGGCCACTA CCTGGAGGACGATCCTGCCTATGCCGCCAAGGCCGCCCGGATCGCCGAAATTGCCTGTGACCCCTCGCAGTGGTTGGCTC GTGAACTGGGGGCGCGGTCCATTCCGGGCATCGCGCGGGGGCGCATCGCCTTTCACGCCCCCTGTTCCTTGCAACATGGA CAGCGACTGGCGGGCGTCGTGGAGGGAATCCTGACACGCCTCGGCTACCAACTCAGTGAGATCGGCGATGCCGAACTGTG CTGTGGTTCCGCCGGGAGCTATTCCCTACTGCAACCACAGCTTGCCGCGCAGTTACGCCGGAACAAGCTGGATAGGCTCG AGAAGGACGAGCCCAAGCGTATTGCCACCGCCAATGTCGGCTGCCAGTTGTACCTTGCCCAAGAAGCCAGGGTACCAGTG GTGCACTGGCTGGAACTGGTGGACGAGGCGCTCGTCGACGTGGGTACGCCTTAG Protein sequence : MQTQIAPQYRADPLVGEAESILRDCVHCGFCNATCPTYRILGDEQDGPRGRIYLIKALLAGEQTTETTRLHLDRCLGCRA CETTCPSGVRYGRLLEIGRHLQNQALPRPPRAALERRLLRYVVTEPKRFRAALGLGRVFKPLLKASLARTLPPLPAESPD SARSEVAVASSAGRRVLHLDGCVQSVATPATRAALARILQRLGVDLRSAPTATCCGALSLHLDAWDEARALMRGNIDAWW PYLEDGAQAILVSASGCGSVVKDYGHYLEDDPAYAAKAARIAEIACDPSQWLARELGARSIPGIARGRIAFHAPCSLQHG QRLAGVVEGILTRLGYQLSEIGDAELCCGSAGSYSLLQPQLAAQLRRNKLDRLEKDEPKRIATANVGCQLYLAQEARVPV VHWLELVDEALVDVGTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 2e-82 | 50 |
