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Name : Atc_2414 (Atc_2414) Accession : YP_004749764.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : glycolate dehydrogenase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2468581 - 2470050 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGAATCGAGCCAAAACGCCGCAAGTGGGTGTCATCGAGGCGCTGGCGGCGGTCCTGCCCGCCGAAGCTCTCCTCACCGA GCCTGAATCCATGCGGCCCTACGAGTGCGACGGCCTGTCCGCCCTGCGGGGGACGCCACTGTGCGTTGCCCTCCCGGAGA CGGCCGAGGCGGTCGCTGCGGTCTTGGCGATCTGCCATCGTCATGGCGTCGCCGTGGTGCCGCGCGGGGCGGGCACCGGC CTGTCCGGTGGTGCGCGACCCAGCACTGGGGCGGTGCTTTTGTCCCTGGCCCGCTTGCGGGATATGGACGCCATCGACTT TGCCAATGTCTGCATCCGAGTCGGCCCGGGAGTGCGCAATCTGGCCATCAGCCAAAAAACGCGTCCCCACGGTCTTTACT ACGCACCCGACCCATCCTCGCAGATTGCCTGCAGTATTGGCGGTAACCTGGCGGAAAACTCCGGTGGGGTCCATTGCCTC AAATATGGCCTGACCACCCACAACGTGCTGGCGGCGGAGGTCCTGGACGCCCGTGGGGAAAGGCTCGAGATCGGAAGCCT CGCGCCCGATAGCCCCGGTTACAACCTCCTTTCCCTGATCATCGGCTCGGAGGGACTGCTAGGGGTGGTGACCTCCTGCC AGCTGCGCCTGCTGCCGGTGCCGGAAGAGACGGTGCTGCTCCTGGCGGCCTTTGGGGATGTGGGGCGGGCGGCGGATGCC GTCAGCGCCATCATCGCCGCCGGTATCCTCCCCGCCGGTCTCGAGATGATGGATCGCCTGGCCATCGCCGCCGCCGAGGA TTTCGTGCACGTCGGCTATCCCCGCGAGGCGGCGGCCATCCTCCTCTGCGAGCTGGACGGGGATGCGCAGGAGATCGCGG CGGATCAAGCCCGGGTGGAGACCATTCTGCGCGAACACGGTGTGGAAGACCTGCGTCTCGCCCGCGACGAGGCCACCCGC CTCGCCCTATGGAAGGGGCGCAAGGCCGCCTTTCCCGCCGTCGGCCGTCTGGCTCCGGATTACTACTGTATGGACGGTAC CATTCCCCGGGTGCGCTTGGCGGAGGTTCTGGCCCAAATCGCTGAGCTTTCCCGTAAATTCGGACTGCCCGTCGCCAATG TTTTCCACGCCGGCGATGGCAATCTCCATCCCCTCATTCTCTACGATGCCAATGTCGAGAGACAGCAGCAGCAGGCGGAG CAACTGGGAGCGGAGATCCTGGAACTCTGCGTGCGGGTGGGCGGCACCATTACCGGCGAACACGGTGTTGGCGTCGAAAA ACTGGACAGCATGTGTGTGCAGTTCACGCCGGAGGAGCTGGCGCAGCTGCATCGCATCAAGGCCGCCTTCGATCCCGAGG GGCGGCTCAATCCCGGCAAAGCCGTCCCCACGCTGCACCGTTGCGCCGAGCTCGGGGCCATGCATGTGCATGCAGGTAGT CTGCCCTTTCCGGAGCTGGAGCGCTTTTGA Protein sequence : MNRAKTPQVGVIEALAAVLPAEALLTEPESMRPYECDGLSALRGTPLCVALPETAEAVAAVLAICHRHGVAVVPRGAGTG LSGGARPSTGAVLLSLARLRDMDAIDFANVCIRVGPGVRNLAISQKTRPHGLYYAPDPSSQIACSIGGNLAENSGGVHCL KYGLTTHNVLAAEVLDARGERLEIGSLAPDSPGYNLLSLIIGSEGLLGVVTSCQLRLLPVPEETVLLLAAFGDVGRAADA VSAIIAAGILPAGLEMMDRLAIAAAEDFVHVGYPREAAAILLCELDGDAQEIAADQARVETILREHGVEDLRLARDEATR LALWKGRKAAFPAVGRLAPDYYCMDGTIPRVRLAEVLAQIAELSRKFGLPVANVFHAGDGNLHPLILYDANVERQQQQAE QLGAEILELCVRVGGTITGEHGVGVEKLDSMCVQFTPEELAQLHRIKAAFDPEGRLNPGKAVPTLHRCAELGAMHVHAGS LPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 8e-121 | 64 |
