Gene Information

Name : Atc_r0003 (Atc_r0003)
Accession : -
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2528387 - 2529829 bp
Length : 1443 bp
Strand : -
Note : -

DNA sequence : 
GGCAGCAGGTCCTTCGGGATGCTGGCGAGTGGCGGACGGGTGAGTAATGCGTAGGAACCTATCCTTTTGTGGGGGACAAC
CCAGGGAAACTTGGGCTAATACCGCATAAGCCCTGAGGGGGAAAGCGGGGGATCTTCGGACCTCGTGCTGAAGGAGGGGC
CTACGTCCGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCGGTAGCTGGTCTGAGAGGACGACCAGCCA
CACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTTCGCAATGGGGGCAACCCTGACGAA
GCAATGCCGCGTGGATGAAGAAGGCCTTCGGGTTGTAAAGTCCTTTCGTGGGGGACGAAAAGGCGGATCCGAATACGGTC
TGCTGTTGACGTGAACCCAAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA
ATCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGTGGGTTACGTCTGCCGTGAAATCCCCGGGCTCAACCTGGGAATGG
CGGTGGAAACGGGCTGACTGGAGTATGGGAGAGGGTGATGGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAG
GAACACCAGTGGCGAAGGCGGTCACCTGGCCCAATACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGAT
ACCCTGGTAGTCCACGCCCTAAACGATGGATACTGGATGTTTGGCGCCTTAGGTGCTGAGTGTCGTAGCTAACGCGATAA
GTATCCCGCCTGGGAAGTACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTG
GTTTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATGTCCGGAACCCTGCAGAGATGTGGGGGTGCCCTTCG
GGGAATCGGAACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAA
CCCTTGTTCCTAGTTGCCAGCGGTTCGGCCGGGCACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGA
CGTCAAGTCCTCATGGCCTTTATGTCCAGGGCTACACACGTGCTACAATGGCGCGTACAGAGGGAAGCCAAGCCGCGAGG
TGGAGCAGACCCCAGAAAGCGCGTCGTAGTTCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAAT
CGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGATGGTACCA
GAAGCCGTTAGCCTAACCTTCGGGGGGGGCGACGACCACGGTATGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCC
GTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-131 86.6
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-131 86.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-131 85.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-131 85.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-131 85.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-131 85.2