Gene Information

Name : Atc_0932 (Atc_0932)
Accession : YP_004748281.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 929066 - 929362 bp
Length : 297 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGATGTAACGGGTATTGCACTGGGTATGATCGAGACCCGCGGTTTGGTGCCGGCCATCGAGGCGGCGGATGCCAT
GACCAAGGCGGCGGAAGTGCGCCTGATTGGTCGCCAGTTTGTGGGTGGCGGTTACGTCACCGTGCTGGTACGTGGTGAGA
CGGGTGCGGTGAATGCGGCGGTACGTGCGGGTGCCGATGCCTGCGAGCGGGTGGGTGACGGTTTGGTGGCGGCGCACATC
ATTGCCCGCGTGCACTCCGAAGTGGAGAACATCCTGCCCAAGGCACCCACCGCCTGA

Protein sequence : 
MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARVHSEVENILPKAPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-11 58
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_0932 YP_004748281.1 carboxysome shell protein CsoS1 VFG1596 Protein 2e-11 58
Atc_0932 YP_004748281.1 carboxysome shell protein CsoS1 VFG1597 Protein 2e-11 53
Atc_0932 YP_004748281.1 carboxysome shell protein CsoS1 VFG1598 Protein 7e-11 49