Gene Information

Name : Atc_0933 (Atc_0933)
Accession : YP_004748282.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 929516 - 929824 bp
Length : 309 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGAGACCCGCGGTTTGGTGCCGGCCATCGAGGCGGCGGATGCCATGACCAAGGCGGCGGAAGTGCGCCTGATTGG
TCGCCAGTTTGTGGGTGGCGGTTACGTCACCGTGCTGGTACGTGGTGAGACGGGTGCGGTGAATGCGGCGGTACGCGCGG
GTGCCGATGCCTGCGAGCGGGTGGGTGACGGTTTGGTGGCGGCGCACATCATTGCCCGCGTGCACTCCGAGGTGGAGCAC
ATCCTGCCCAAGGCGCCCAGTGCCGAGGGAAGCGGTCGCGACGGTGATGTGACCGGCAATCTCAGCTGA

Protein sequence : 
MIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVEH
ILPKAPSAEGSGRDGDVTGNLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 51
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-09 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_0933 YP_004748282.1 carboxysome shell protein CsoS1 VFG1596 Protein 5e-10 56
Atc_0933 YP_004748282.1 carboxysome shell protein CsoS1 VFG1597 Protein 6e-10 51
Atc_0933 YP_004748282.1 carboxysome shell protein CsoS1 VFG1598 Protein 2e-09 47