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Name : glcD (CFU_0739) Accession : YP_004751396.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Unknown Product : glycolate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 869234 - 870733 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAACGCGGAAACAGCGGCGCCCGCCGAATCCACCTTTAGCCCGGCCCGCCAGCAACAGGTAGTCAGTGCTTTGCGGGC GCTGCTGCCGGCGCATGCGCTGTTATCCAATATCGAAGATACCCGGCCCTACGAATGCGATGGCCTGGCCGCCTATCGGC AAACGCCGATGGTGGTGGCGCTCCCTGAGAACGAGGAACAGGTGGTGGCCATCCTCAAGGCGTGCCGCGATCTCAAGGTG CCTATCGTGCCGCGCGGCGCCGGTACCGGCCTGTCCGGCGGCGCCATGCCGATCGCCGACGGCGTGGTCTTGTCCACCGC CAAATTTACCCGCATCGTCAAGCTCGATCAGTATGCACGGACTGCGGTGGTGCAGCCGGGTGTGCGCAACCTGGCCATTT CCGAGGCGGCGGCCGCCCACGGCCTGTATTACGCGCCAGACCCGTCATCGCAGATCGCCTGCACCATTGGCGGCAACGTG GCGGAGAATTCGGGCGGCGTGCATTGCCTGAAATACGGCCTTACCGTGCATAACGTATTGCGTGTGCGGATGGTGACCAT CGAAGGCGAGGTAGTCGAACTCGGCAATGGCGCACTGGATGCGCCCGGCCTCGACTTGCTGGCGGTCTTCATCGGCTCGG AAGGCATGCTGGGCGTGGTCACCGAGGTCACGGTCAAGCTGATTCCCAAACCGCAGGCGGCGCGCGTCATCATGGCGTCG TTCGACGACGTGGTGAAGAGCGGCAATGCGGTCGCCAACGTGATTGCCGCCGGCATCATTCCGGCCGGCCTGGAGATGAT GGACCGCACCAGTTCGCGCATGGTGGAACCGTTCGTCAAGGCCGGCTACGATATCGACGCCGCTGCCATCCTGTTATGCG AATCGGACGGTACCGCGGAAGAGGTGGAAGAGGAAATCGGCCGCATGAGCGCGGTGTTGAACGCCAGCGGCGCCACCCGC ATCGAGGTCTCGACCTCCGAGGCGGAGCGCTTGCGTTTCTGGTCTGGCCGCAAGAATGCCTTTCCGGCAGCCGGTCGCAT TTCACCCGATTACTACTGCATGGACGGCACCATCCCGCGCAAGAACCTGGCGCAGGTGCTGCTGGGCATCGAACAGATGG AAAACAAATACGGCCTGCGCTGCGCCAATGTGTTCCATGCCGGCGACGGCAACCTGCATCCGCTGATTCTGTTCGACGCC AATGTGCCGGGCGAATTCCATCGCGCCGAAGAGTTCGGTGCCGAGATCCTTGAACTGTGCGTTGCCGTCGGCGGCACTAT CACGGGCGAACACGGCGTCGGCATCGAAAAGATCAATTCGATGTGCGTACAGTTTTCACCGCTGGAGCGTGAAGCTTTCT TCAATGTCAAACGCGCCTTCGATACCGCATTCCTGCTCAATCCGGACAAGGCGATCCCCACTTTGCAGCGTTGCGCCGAG TACGGCAAGATGCATGTGCAGCGCGGCCAGCTGAAATTTGCGGAACTCCCGCGCTTCTAG Protein sequence : MNAETAAPAESTFSPARQQQVVSALRALLPAHALLSNIEDTRPYECDGLAAYRQTPMVVALPENEEQVVAILKACRDLKV PIVPRGAGTGLSGGAMPIADGVVLSTAKFTRIVKLDQYARTAVVQPGVRNLAISEAAAAHGLYYAPDPSSQIACTIGGNV AENSGGVHCLKYGLTVHNVLRVRMVTIEGEVVELGNGALDAPGLDLLAVFIGSEGMLGVVTEVTVKLIPKPQAARVIMAS FDDVVKSGNAVANVIAAGIIPAGLEMMDRTSSRMVEPFVKAGYDIDAAAILLCESDGTAEEVEEEIGRMSAVLNASGATR IEVSTSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTIPRKNLAQVLLGIEQMENKYGLRCANVFHAGDGNLHPLILFDA NVPGEFHRAEEFGAEILELCVAVGGTITGEHGVGIEKINSMCVQFSPLEREAFFNVKRAFDTAFLLNPDKAIPTLQRCAE YGKMHVQRGQLKFAELPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 5e-140 | 65 |
