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Name : secD (CFU_0766) Accession : YP_004751423.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Unknown Product : protein-export membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 900231 - 902096 bp Length : 1866 bp Strand : + Note : - DNA sequence : ATGAATCGCTATCCTCTCTGGAAATATATCCTGATCGTCATCGCGCTGCTGTTCGGCGTGCTGTACACCATACCGAATCT GTTTGGCGAATCGCCCGCGGTACAGGTGAGCAGCGGCAAATCGACCTTGAAGATCGACAGCTCGCTGGCTGACCGGGTGT CGCAAGTGCTACAGCAAGGCAATTTGCTGACCGACAGCGTCACGTTCGAGAACGCCGGCGCCCAAGGCACGGTGCGCGCC CGTTTCCACGATACCGACACCCAGTTCAAGGCCAAGGCTTTGCTGGAACAGACACTGAATACCGATCCGACCGATCCGGT CTATGTGGTGGCCTTCAACCTGGTGCCGAATACGCCGCACTGGCTGCAAGCCATCCACGCATTCCCGATGTACCTGGGGC TCGACTTGCGCGGCGGCGTGCACTTCCTGATGCAAGTCGACACCAAGGCGGTAATCAACAAGCGCCTGCAGGGTTTGCAA GCCAGCGCCCGCACCGAACTGCGCGACAAGGATATCCGTTACAGCGGCATCAACCGCAATGGCGATACGATAGAAATCAG TTTCCGCGACCAGGATACGCTGAACAAGGCGCTCAACATATTGGCGCCGCAACTGTCCGAGATGTCGATCCAGGCAGTAC TGCCGGTGGCCGGCGCCGACCCGATGCTGAGCGCATCGCTGAAGCCTGAAGCACTGAAGCAGATCGTCGACAACGGCGTC ACGCAAAACATCACGACCTTGTCGAAACGGGTCAATGAACTGGGCGTCAGCGAACCGATCATTCAGCGCCAGGGCGCTGA CCGTATCGTGGTGCAGATGCCCGGCGTGCAAGATGTCTCGCGCGCAAAGGACATCATCGGCCGTACCGCGACGCTGGAAG TGCGGATGGTGGATGAATCGGTAACCCGCGGCACGGAAGCCACCGCCGCGGTGCCTTTCGGTTCCGAACTGTTCAAGGTC GGCAAGAATGCGCCGGTAGTGCTGTACAAGGACCCTGTGCTGACCGGCGACTATATCTCCAGCGCTGCCGTCAGTTTCGA CCAGAACCAGCAGCCTGCGGTCAGCATCGACCTCAACGGCGACGGCGGCCGCAAGATGCGCGATGCTACCCGCGGCAAGG TCGGCAAGGCGATGGCGATCGTGCTGTTTGAAAAAGGCAAGGGCGAAGTCCTGACCGTGGCGACGATCCAGAGCGAACTG GGTTCGCGCTTCCAGATCACCGGCATGGGTTCGCCTGAAGCGGCGGCCGACCTGGCGCTGCTGCTGCGCGCCGGTTCGCT GGCGGCGCCGATGACCATCATCGAAGAACGCACCATCGGCCCGCAACTGGGCGCCGAGAATATCAAGAAGGGTTTTGACT CGACCATGTACGGTTTCGCCGTCATCGCCGTGTTCATGATCATCTACTACATGCTGTTCGGCCTGTTCAGCGTGCTGGCG CTGTCGGTCAACCTGCTGCTGCTGATCGCGGTGCTGTCGACCTTGCAGGCGACGCTGACCTTGCCGGGTATCGCCGCGAT TGCGCTGACCCTTGGTATCGCGATCGACGCCAACGTGCTGGTGAATGAACGTATCCGCGAAGAACTGCGCAACGGCAATT CGCCGCAGGCAGCGATCTCGATCGGTTTCGACCGCGCCTGGGCCACGATCCTGGACTCCAACGTGACGACGCTGATCGCC GGCCTGGCATTGCTGATTTTCGGTTCCGGCGCCATCCGCGGTTTTGCGGTGGTGCATTGCCTGGGCATCCTGACTTCGAT CTTCTCGGCAGTGTTCGTTTCGCGCGGTTTCGCCAACCTCTGGTACGGCCGCAAGAAGAAACTGACCAGCCTGTCGATCG GCCAGATCTGGAAACCGAACGCCTGA Protein sequence : MNRYPLWKYILIVIALLFGVLYTIPNLFGESPAVQVSSGKSTLKIDSSLADRVSQVLQQGNLLTDSVTFENAGAQGTVRA RFHDTDTQFKAKALLEQTLNTDPTDPVYVVAFNLVPNTPHWLQAIHAFPMYLGLDLRGGVHFLMQVDTKAVINKRLQGLQ ASARTELRDKDIRYSGINRNGDTIEISFRDQDTLNKALNILAPQLSEMSIQAVLPVAGADPMLSASLKPEALKQIVDNGV TQNITTLSKRVNELGVSEPIIQRQGADRIVVQMPGVQDVSRAKDIIGRTATLEVRMVDESVTRGTEATAAVPFGSELFKV GKNAPVVLYKDPVLTGDYISSAAVSFDQNQQPAVSIDLNGDGGRKMRDATRGKVGKAMAIVLFEKGKGEVLTVATIQSEL GSRFQITGMGSPEAAADLALLLRAGSLAAPMTIIEERTIGPQLGAENIKKGFDSTMYGFAVIAVFMIIYYMLFGLFSVLA LSVNLLLLIAVLSTLQATLTLPGIAAIALTLGIAIDANVLVNERIREELRNGNSPQAAISIGFDRAWATILDSNVTTLIA GLALLIFGSGAIRGFAVVHCLGILTSIFSAVFVSRGFANLWYGRKKKLTSLSIGQIWKPNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-91 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-91 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-91 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-91 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-92 | 41 |
