Gene Information

Name : Cycma_2860 (Cycma_2860)
Accession : YP_004774829.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3334672 - 3334869 bp
Length : 198 bp
Strand : -
Note : PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: chu:CHU_2346 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA

DNA sequence :
ATGAACACAGGAAAAGTAAAATTTTTTAATGAATCTAAAGGATTCGGTTTTATTATTGATGATGAATCATCAAAAGAGTA
TTTTGTGCATGTCTCTGGACTAATTGACGAAATCAGAGAAGACGATGATGTATCCTTTGATCTTAAAGAAGGAAGAAAAG
GTCTGAATGCAGTGAATGTGAAGGTAGTAAACGCATAA

Protein sequence :
MNTGKVKFFNESKGFGFIIDDESSKEYFVHVSGLIDEIREDDDVSFDLKEGRKGLNAVNVKVVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-07 46