Gene Information

Name : Cycma_4345 (Cycma_4345)
Accession : YP_004776278.1
Strain : Cyclobacterium marinum DSM 745
Genome accession: NC_015914
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 5275721 - 5275915 bp
Length : 195 bp
Strand : +
Note : PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: dfe:Dfer_4688 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-bindin

DNA sequence :
ATGCAAGAAGGAACAGTTAAATTTTTCAACGAAGAAAAGGGATACGGATTTATTACTCCTAGTGATTCAGGTAAAGACAT
TTTCGTACACAACAGTGGCTTGATCGATGAGATCAGAGAAAATGACAAAGTATCTTACGAAGAAGAGCAAGGTCGTAAAG
GTCTTAACGCAGTTAACGTTGAAGTAATCGGTTAA

Protein sequence :
MQEGTVKFFNEEKGYGFITPSDSGKDIFVHNSGLIDEIRENDKVSYEEEQGRKGLNAVNVEVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-09 47