Gene Information

Name : LCGT_0447 (LCGT_0447)
Accession : YP_004778624.1
Strain : Lactococcus garvieae ATCC 49156
Genome accession: NC_015930
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 463353 - 464141 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence : 
ATGCTATTAGAAGTTAAACATATCAAAAAAGTTTTCAAAACACGCTTTTCAAAAGAAGAAACAACAGCTCTTGCGGACAT
CGATTTTTCTGTCGAAGAAGGTGAATACATTGCCATTATGGGTGAATCAGGTTCAGGTAAAACAACACTCTTGAATATTT
TATCAACTTTGGAAAAACCCACAGCTGGTCAAGTTTTACTTTCAGGACGTGACATTACAGCTATTAAAGACAAGGACATC
TCAGCATTCCGCCGTGAGCACCTTGGCTTTGTCTTCCAAGACTTCAACCTCTTGGACACGCTATCTGTAAGAGACAATAT
TTACCTGCCAATGGTTCTTTCGAAAGCGCCAGTAAAGAAGATGAAAGCACGTTTGGAAAACTTAGCGCCCAAGTTGAATA
TTGAAACCCTTTTAGAAAAACAACCTTTTGAGCTATCTGGGGGACAAAAACAGCGTGTTGCTGTTGCGCGTGCTCTGATT
TCTCAACCCGATCTTGTTTTGGCAGATGAGCCAACAGCAGCCTTGGACTATAAAAACTCTGAAAGTTTGCTTGAGCTTTT
CGAAAATATCAATGATGCTGGGCAAACCATTATCATGGTTACTCACTCAAGCCTAGCTGCAAGTCACGCAAAACGTGTTC
TCTTTATTAAAGACGGAATGCTTTATCATCAGCTTTATCGTGGCGATAAGTCATCCACAGAGTTTGCAAAAGAAATTACC
TTGTCAATGACTTCATTCTTGGGGGCTTCGACAGACCCAACTGAAACGGAGGTAGCCAATAATGCTTAG

Protein sequence : 
MLLEVKHIKKVFKTRFSKEETTALADIDFSVEEGEYIAIMGESGSGKTTLLNILSTLEKPTAGQVLLSGRDITAIKDKDI
SAFRREHLGFVFQDFNLLDTLSVRDNIYLPMVLSKAPVKKMKARLENLAPKLNIETLLEKQPFELSGGQKQRVAVARALI
SQPDLVLADEPTAALDYKNSESLLELFENINDAGQTIIMVTHSSLAASHAKRVLFIKDGMLYHQLYRGDKSSTEFAKEIT
LSMTSFLGASTDPTETEVANNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_0447 YP_004778624.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-40 47
LCGT_0447 YP_004778624.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 43
LCGT_0447 YP_004778624.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCGT_0447 YP_004778624.1 ABC transporter ATP-binding protein VFG2059 Protein 4e-19 42