Gene Information

Name : Acife_2642 (Acife_2642)
Accession : YP_004785046.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2626289 - 2626765 bp
Length : 477 bp
Strand : -
Note : KEGG: afr:AFE_0399 ribonuclease HI; HAMAP: Ribonuclease H; PFAM: Ribonuclease H

DNA sequence :
ATGCCAAAAAAAATCATAGAGTTATTTACCGATGGGGGTTGCCGCGGTAATCCGGGTATGGGGGCTTGGGGTGCGTGTCT
GCGGCTGGCAGGGCAGGAGAAGGTCTTATGGGGCTTCGTTCCGGAAACGACGAACAACCGAATGGAGTTGACCGCGGCTT
TGCGTGGCCTGGAGGCACTTAAACGTCCCAGCGTCGTGCGGGTAATCAGTGATTCCCGTTATCTGCGCGATGGTATGACC
CAATGGCTGGCTGGCTGGCAGCGCCGGGGCTGGCGGACGGCCGCTGGGGATGCGGTAAAAAATAAGGACATTTGGGAGCG
CTTGGTGACCGTGGCGGCACCTCACGAGATTCAATGGGAGTGGGTGAGAGGGCACTCGGGGCATATCGAGAATGAACGGG
TAGACGCGTTGCTGAATCTGGTCATGGATCAATGTGCAGCGGGTGGGCAGGCACAGGAGGGGGAAGGATGGCTGTGA

Protein sequence :
MPKKIIELFTDGGCRGNPGMGAWGACLRLAGQEKVLWGFVPETTNNRMELTAALRGLEALKRPSVVRVISDSRYLRDGMT
QWLAGWQRRGWRTAAGDAVKNKDIWERLVTVAAPHEIQWEWVRGHSGHIENERVDALLNLVMDQCAAGGQAQEGEGWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-29 52