Gene Information

Name : Acife_R0046 (Acife_R0046)
Accession : -
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2641832 - 2643355 bp
Length : 1524 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGGTAGCAGGCCTTCGGGTGC
TGACGAGTGGCGGACGGGTGAGTAATGCGTAGGAATCTGTCTTTTAGTGGGGGACAACCCAGGGAAACTTGGGCTAATAC
CGCATGAGCCCTGAGGGGGAAAGCGGGGGATCTTCGGACCTCGCGCTAAGAGAAGAGCCTACGTCTGATTAGCTAGTTGG
TAGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCC
AGACTCCTACGGGAGGCAGCAGTGGGGAATTTTTCGCAATGGGGGCAACCCTGACGAAGCAATGCCGCGTGGATGAAGAA
GGCCTTCGGGTTGTAAAGTCCTTTCGTGGGGGACGAAAAGGTGGTTCCTAATACGAGCTGCTGTTGACGTGAACCCAAGA
AGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAG
GGTGCGTAGGCGGTACGTTAGGTCTGTCGTGAAATCCCCGGGCTCAACCTGGGAATGGCGGTAGAAACCGGCGAACTAGA
GTATGGGAGAGGGTGGTGGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACATCAGTGGCGAAGGCGGC
CACCTGGCCCAATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAA
ACGATGAATACTAGATGTTTGGTACCTAGCGTACTGAGTGTCGTAGCTAACGCGATAAGTATTCCGCCTGGGAAGTACGG
CCGCAAGGTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAA
GAACCTTACCTGGGCTTGACATGTCCGGAATCCTGCAGAGATGCGGGAGTGCCCTTCGGGGAATCGGAACACAGGTGCTG
CATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAGCG
GTTCGGCCGGGCACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCTTTA
TGTCCAGGGCTACACACGTGCTACAATGGCGCGTACAGAGGGACGCCAAACCGCGAGGTGGAGCAGACCCCAGAAAGCGC
GTCGTAGTTCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTG
AATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTAGATTGTACCAGAAGCGGCTAGCCTAACCTTCG
GGAGGGCGGTTACCACGGTATGGTTTATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC
ACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-143 89.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-143 89.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-143 88
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-143 88
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-143 87.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-143 87.2