Gene Information

Name : Acife_3139 (Acife_3139)
Accession : YP_004785533.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3065573 - 3065869 bp
Length : 297 bp
Strand : -
Note : PFAM: Microcompartment protein, bacteria; KEGG: afr:AFE_1684 carboxysome shell peptide

DNA sequence : 
ATGGCAAACGTCAGCGGAGTGGCACTGGGTATGATTGAAACGCGCGGCCTGGTGCCGGCGATCGAGGCGGCGGACGCGAT
GACCAAGGCGGCGGAAGTGCGCCTGGTGGGTCGCCAGTTCGTGGGCGGCGGCTATGTCACCGTGCTGGTGCGCGGTGAGA
CCGGCGCGGTGAATGCGGCGGTGCGGGCCGGGGCGGATGCGTGTGAGCGTGTCGGCGATGGCCTGGTGGCCGCCCACATC
ATCGCCCGCGTGCACAGTGAAGTGGAGAATATTCTGCCCAACAGCCCGGTGGAATGA

Protein sequence : 
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARVHSEVENILPNSPVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 55
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 51
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-10 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acife_3139 YP_004785533.1 microcompartments protein VFG1596 Protein 3e-11 55
Acife_3139 YP_004785533.1 microcompartments protein VFG1597 Protein 2e-11 51
Acife_3139 YP_004785533.1 microcompartments protein VFG1598 Protein 2e-10 48