Gene Information

Name : Acife_0085 (Acife_0085)
Accession : YP_004782651.1
Strain : Acidithiobacillus ferrivorans SS3
Genome accession: NC_015942
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 100110 - 100313 bp
Length : 204 bp
Strand : +
Note : KEGG: afr:AFE_0590 cold-shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCAACTGGTACAGTAAAGTGGTTCAACGATAGTAAAGGTTTTGGTTTCATCACGCCGGAAGATGGTAAAGAGGATGT
GTTTGTGCATCACTCTGCTATCCAGGGCAGCGGCTTTAAGACTCTTGCGGAAGGCGCGCGCGTAACGTTTAACAGTGTTC
GCGGCCCGAAAGGCATGCAGGCTGAGGACGTGCGCGAGGCATAA

Protein sequence :
MATGTVKWFNDSKGFGFITPEDGKEDVFVHHSAIQGSGFKTLAEGARVTFNSVRGPKGMQAEDVREA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 6e-14 62
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-04 41