Gene Information

Name : BurJV3_2720 (BurJV3_2720)
Accession : YP_004793266.1
Strain : Stenotrophomonas maltophilia JV3
Genome accession: NC_015947
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 2995235 - 2997154 bp
Length : 1920 bp
Strand : +
Note : KEGG: sml:Smlt3273 cytochrome c-type biogenesis protein; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein

DNA sequence :
GTGCTGCCCGAACTGGGTCAGATCCTGCTGCTGTGCGCGTTGCTGGCCTCGCTGCTGCAGGCTGGCCTGCCGCTGGTGGG
CGCGCATCGCAACAACCCGGCCTGGATGGCAGTGGCGCGACCGGCCGCGTTCGCACAGCTGCTGCTGGTCGCCGGCGCGT
TCGCGGTGCTCACTGCGGCATTCGTGCAGCAGGATTTCTCGGTGCGCTACGTGGCCGAGAACTCCAATTCGCTGCTGCCG
ATGATCTACCGCTATTCGGCGGTGTGGGGCGCGCACGAAGGCTCGCTGTTGATGTGGGCGCTGGTACTGGCGCTGTGGAC
CGGCGCGGTGGCGCTGTTCTCGGGGCATTTGCCCGCGCATGTGCAGGCGCGCGTGCTGGCGGTGATGGGCGTGGTCAGCG
TCGGCTTCCTTGCCTTCCTGATCTTCACCTCCAACCCGTTCCTGCGCCTGAACCCGGCACCGCTGGAAGGCCGCGACCTC
AATCCGCTGCTGCAGGACCCGGGGCTGATCATCCATCCGCCGATGCTGTACCTGGGCTATGTCGGCTTCGCGGTGCCATT
CGCGTTCGCGGTGGCCGCACTGCTGGAAGGCCGCATCGACGCACGCTGGCTGCGCTGGACGCGGCCGTGGACCAACGTCG
CCTGGGGGTTCCTGACCCTGGGCATCGCGCTGGGCAGCTGGTGGGCCTATTACGAGCTGGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTGGAGAACGCCAGCTTCATGCCATGGCTGGTCGGTGCGGCATTGATCCACTCGCAGGCCGTCACTGAAAA
GCGCGGCACCTTCGGCAGCTGGACGCTGTTGCTGGCGATCGCCGCCTTCGCGCTGTCGCTGCTCGGCACCTTCCTGGTGC
GCTCCGGCGTGCTGACCAGCGTGCATTCGTTCGCCGCCGATCCCTCGCGCGGCCTGTTCATCCTGGTGTTCCTGTCGGTG
CTGGTGGGCGGCAGCCTGCTGCTGTATGCGCTGCGTGCCAGCCAGCTGAGCGTGGACGCCGACGATCCGCGCCGTGGCTT
CACCGCCACCTCGCGCGAGACCCTGCTGCTGGCCAACAACCTGCTGCTGGCCACCGCCTGCGCGATGGTGCTGCTCGGCA
CGCTGTACCCGCTGCTGGCCGATGCGCTGTCGCTGGGCAAGATCTCGGTCGGCCCGCCCTACTTCGGCAGCCTGTTCCTG
CTGCTGATGGCGCCGATGATCCTGCTGCTGCCGTTCGGCCCGCTGGTGAAGTGGCAGCGCGACCAGCCCTCGCACGCGTT
CGCGCTGCTGGCACCGTGGCTGGGCCTGGCGCTGCTGCTGGGCGCGCTGGCGTGGTGGCAGGCGCCGCAGAACGGCTGGA
AGGCCGGCATCGGCGTGGCCGCTGCGGCATGGGTCGGGTTGGGTACCGCGCGCTTCGTCTGGCAGCGCCTGCGCGGCAAT
GGCCGCTTCACCGCCGAAATGCTCGGCATGATCGTCGCCCATGCCGGCATCGCCGTGTTCCTGGCCGGCGCACTGCTGGT
GGAAGCGTTGAACGTGCAGCGCGAGGTGGCACTGGCACCGGGCCAGCAGCTGGTAGTCGGCCGCCATGAAGTGCGCTTCG
AGGGCGTGGATCATCGCGAAGGGCCGAATTTCATCGCCGACCGTGGGCACCTGCGCGTGTTCCGCAACGGCCGCGAGCTG
GCGCTGCTGCACCCGGAGAAGCGCCAGTACGCCAGTGGCGGCCAGGTGATGACCGAGGCCGGCATCGATGCACGCTTCGA
CGGTGATGTCTACGTGGCATTGGGCGAGCCGCTGGGCAACAATGCATGGGCGGTCCGGGTGCACATCAAGCCGTTCGTGC
GCTGGATCTGGCTGGGCGCGCTGCTGATGGCCCTGGGCGGATTCATCACCGCCGCCGACCGCCGTTTCCGTCGTCCGTAG

Protein sequence :
MLPELGQILLLCALLASLLQAGLPLVGAHRNNPAWMAVARPAAFAQLLLVAGAFAVLTAAFVQQDFSVRYVAENSNSLLP
MIYRYSAVWGAHEGSLLMWALVLALWTGAVALFSGHLPAHVQARVLAVMGVVSVGFLAFLIFTSNPFLRLNPAPLEGRDL
NPLLQDPGLIIHPPMLYLGYVGFAVPFAFAVAALLEGRIDARWLRWTRPWTNVAWGFLTLGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLVGAALIHSQAVTEKRGTFGSWTLLLAIAAFALSLLGTFLVRSGVLTSVHSFAADPSRGLFILVFLSV
LVGGSLLLYALRASQLSVDADDPRRGFTATSRETLLLANNLLLATACAMVLLGTLYPLLADALSLGKISVGPPYFGSLFL
LLMAPMILLLPFGPLVKWQRDQPSHAFALLAPWLGLALLLGALAWWQAPQNGWKAGIGVAAAAWVGLGTARFVWQRLRGN
GRFTAEMLGMIVAHAGIAVFLAGALLVEALNVQREVALAPGQQLVVGRHEVRFEGVDHREGPNFIADRGHLRVFRNGREL
ALLHPEKRQYASGGQVMTEAGIDARFDGDVYVALGEPLGNNAWAVRVHIKPFVRWIWLGALLMALGGFITAADRRFRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-114 55