Gene Information

Name : Calla_1126 (Calla_1126)
Accession : YP_004798736.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Unknown
Product : FeS cluster assembly scaffold protein NifU
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0822
EC number : -
Position : 1199821 - 1200204 bp
Length : 384 bp
Strand : -
Note : KEGG: ckn:Calkro_1002 fes cluster assembly scaffold protein NifU; TIGRFAM: NIF system FeS cluster assembly, NifU-like; PFAM: NIF system FeS cluster assembly, NifU, N-terminal

DNA sequence :
ATGTATAGCGAAAAGGTTTTAGACCATTTTATGAACCCGCGAAATGTTGGTGAGATTGAGAATGCAGACGGTGTTGCTCA
GGTTGGCAACCCGAAGTGTGGGGATATAATGAAGATGTATCTTAAAATAGAGAATGGTATAATAGTTGATGCAAAGTTTA
AAACATTTGGCTGTGGTGCTGCTGTTGCAACAAGTTCAATGGCAACAGAGATGGTGAAAGGAAAGACAATAGAAGAAGCT
TTGCAGATTACTAACAAAGCTGTTGCAGAAGCTTTAGACGGTCTTCCAGCTAACAAGCTCCACTGTTCGGTTTTAGCCGA
AGAGGCAATTAAAGCCGCAATTGAAGACTATCTTAGCAAGCAAAAAAGCAAAAATACCAACTAA

Protein sequence :
MYSEKVLDHFMNPRNVGEIENADGVAQVGNPKCGDIMKMYLKIENGIIVDAKFKTFGCGAAVATSSMATEMVKGKTIEEA
LQITNKAVAEALDGLPANKLHCSVLAEEAIKAAIEDYLSKQKSKNTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iscU AAT96059.1 IscU Not tested T-PAI Protein 2e-28 59