Gene Information

Name : Calla_1127 (Calla_1127)
Accession : YP_004798737.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Unknown
Product : cysteine desulfurase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 1200206 - 1201390 bp
Length : 1185 bp
Strand : -
Note : TIGRFAM: Cysteine desulfurase, NifS, bacterial/archaeal; HAMAP: Cysteine desulfurase; KEGG: cki:Calkr_1728 cysteine desulfurase NifS; PFAM: Aminotransferase, class V/Cysteine desulfurase

DNA sequence :
ATGGAAGGAAAAATTATTTATTTTGACCATGCAGCGACAACCCCTCTTAAAAAGGAAGTATTAGATGAGATGATGCCGTA
TTTGACAGAGCAGTACGGCAATCCTTCAACAATTTACAAGCTCGGAAGAGAAGCAAAAAAAGCTATTGAACTTGCAAGAG
AAAGGGTCGCAAAGGCCTTAAATGCAGATATTCAAGAAATTTACTTTACCTCCGGTGGAACAGAATCAGATAACTGGGCA
TTAAAAGGAGTTGCTTTTGCAAATAAAGATAAAGGCAAGCATATTATAACAACAACAATAGAGCACCATGCAGTTTTGCA
TCCTCTAAAATATCTTGAAGGTTTAGGATTTGAAGTCACATATGTTCCTGTTGAGCCAAATGGCATTGTTGACCCTCAAA
GAATAAAAGAGGCAATAAGAGATGACACTATTTTAATTTCTGTCATGCTTGCAAATAACGAAATTGGGACAATCCAGCCT
GTCAAAGAGATAGCAAAGATAGCAAAGGAAAAGGGAATAATTGTTCATACAGATGCTGTTCAAGCAGTTGGGCAAATTCC
TGTTGATGTGAAAGATTTGGGTGTCGACCTTTTATCACTTTCTGCTCATAAGTTCTATGGGCCAAAAGGTGTTGGTGCAC
TCTATATTAGAAAAGGGACAAAGATTCATCCATTTTCGCATGGAGGTGCACAGGAGAGAAATAGGCGTGCTGGAACAGAG
AATGTAGCAGGGATTGTTGGACTTGGCAAGGCTATAGAGCTTGCAACTCAGAATCTTTCTGAGTATGCTGCAAAGCTTCA
GAAACTGAGAGATAAGCTCATTGATGGTGTGCTGAGCAAAATTGATTATGTTCGACTCAATGGCGACAGAAACCAGAGAC
TTCCTAACAATGCAAACTTCTCATTTGAGTTTATTGAAGGTGAAAGTCTTCTTTTGATGCTTGACATGAAAGGAATTGCA
GCATCAAGCGGGTCTGCATGTACATCAGGGTCTTTGGACCCTTCACATGTGCTGCTGGCAATTGGGCTTGAACACGAGGT
TGCTCATGGGTCTTTGAGAATAACACTTGGTGAAGATAACACCGAGGAAGATATAGACTATCTTTTAGAAGTTTTACCTG
AAATTGTTTCAAGACTAAGAGAAATGAGTCCGCTTTATGAAAGTGTAAAGAAAGGAGGCAAGTGA

Protein sequence :
MEGKIIYFDHAATTPLKKEVLDEMMPYLTEQYGNPSTIYKLGREAKKAIELARERVAKALNADIQEIYFTSGGTESDNWA
LKGVAFANKDKGKHIITTTIEHHAVLHPLKYLEGLGFEVTYVPVEPNGIVDPQRIKEAIRDDTILISVMLANNEIGTIQP
VKEIAKIAKEKGIIVHTDAVQAVGQIPVDVKDLGVDLLSLSAHKFYGPKGVGALYIRKGTKIHPFSHGGAQERNRRAGTE
NVAGIVGLGKAIELATQNLSEYAAKLQKLRDKLIDGVLSKIDYVRLNGDRNQRLPNNANFSFEFIEGESLLLMLDMKGIA
ASSGSACTSGSLDPSHVLLAIGLEHEVAHGSLRITLGEDNTEEDIDYLLEVLPEIVSRLREMSPLYESVKKGGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 4e-59 45