Gene Information

Name : Calla_0396 (Calla_0396)
Accession : YP_004798036.1
Strain : Caldicellulosiruptor lactoaceticus 6A
Genome accession: NC_015949
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 460585 - 460785 bp
Length : 201 bp
Strand : +
Note : KEGG: ckn:Calkro_1897 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence : 
ATGCGAGGTAGGGTAAAATGGTTTAATCCCGAAAAAGGGTATGGATTTATAAGTGCTGACAATGGTGAAGATGTGTTTGT
GCACTTTTCTGCCATCAATATGGAAGGGTACAAGACACTTGCAGAGGGGCAGATGGTTGAGTTTGATATTGTGAAGACAG
AGAGAGGCAATCAGGCTATGAATGTAAGGAAAGTAAAATGA

Protein sequence : 
MRGRVKWFNPEKGYGFISADNGEDVFVHFSAINMEGYKTLAEGQMVEFDIVKTERGNQAMNVRKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-12 56