Gene Information

Name : Halar_1788 (Halar_1788)
Accession : YP_004807876.1
Strain : halophilic archaeon DL31
Genome accession: NC_015954
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1049580 - 1049774 bp
Length : 195 bp
Strand : -
Note : KEGG: nph:NP5064A cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCGACTGGAACGGTTGATTTCTTCAACGACACGGGCGGCTACGGATTCATCGATACTGAGGACGCGGACGAGGACGT
CTTCTTCCACATGGAAGATATTGGCGGTCCCGACCTCGAAGAAGGGCAGGAGGTCGAGTTCGATATCGAGCAGGCCGACA
AGGGCCCCCGCGCGACGAACCTCTCGCGACAGTAA

Protein sequence :
MATGTVDFFNDTGGYGFIDTEDADEDVFFHMEDIGGPDLEEGQEVEFDIEQADKGPRATNLSRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-08 49