|
Name : Strvi_5783 (Strvi_5783) Accession : YP_004815573.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Unknown Product : general substrate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2211 EC number : - Position : 6606602 - 6608023 bp Length : 1422 bp Strand : + Note : PFAM: General substrate transporter; KEGG: sco:SCO1010 integral membrane transport protein DNA sequence : ATGACCACCCCGGATTCTCCGGCCTCCGCTCCCCCGGCCCCACCCGGCTCGCTGCGCCGCATCGTCGCCGCGAGCCTTAT CGGCACCACCATCGAGTGGTACGACTTCTTCCTCTACGGCTCGGCCGCCGCGCTCGTCTTCAACAAGCTCTTCTTCCCGG ACTCCGATCCGCTCGTCGGCACGCTGCTGTCGTTCCTGACCTACGCGGTCGGCTTCGCCGCCCGGCCGGTCGGCGCCCTG GTCTTCGGCCACTACGGCGACCGGCTCGGCCGTAAGAAGCTGCTGATCCTGAGTCTGCTGCTGATGGGCGGCGCGACCTG CGCGATCGGGCTGCTGCCCACCCACGCCACGGTCGGTTCGGCGGCCCCCGTACTGCTCACCGCGCTGCGTCTGATCCAGG GGTTCGCCCTCGGCGGCGAATGGGGCGGAGCGGTGCTGCTGGTGTCGGAGCACGGGGACCCGCGGCGGCGCGGGTTCTGG GCGTCCTGGCCGCAGACCGGCGCCCCCGCCGGGCAGTTGCTGGCCACGGGCGTGCTCTCCGCGCTCACCGCCCTGCTCTC CGACAACGCCTTCGAGGCGTGGGGGTGGCGGGTGCCGTTCCTGCTCTCGGGGGTGCTGGTACTGGTGGGCTTGTGGATTC GTCTCTCTGTCGATGAATCGCCGGTGTTCAAGGCGGCGCAGGCCCGGGCCGAGGCCCGTAAGGCGGCCGCGGGCGAGGCA ACCACCGAGAAGATGCCTCTGGTGGCGGTCCTGCGCCACCACTGGCGGGATGTGCTGATCGCCATGGGCGCGCGGATGGC CGAGAACATCAGCTACTACGTCATCACCGCCTTCGTCCTGGTCTACGCGACCTCCGACCATGTGGACCTCGGCAAGCAGA CCGCGCTCAACGCCGTACTGATCGCCTCGGCCGTGCACTTCGCGGTCATCCCGGCATGGGGCGCGCTGTCGGACCGGATC GGCCGCCGCCCGGTGTATCTCCTGGGCGCGGTCGGCGTGGGCGCGTGGGCCTTCCCCTTCTTCCTCCTCATCGACACCAA GGGCTTCCCGGCGCTGCTGCTCGCCGTGACGGTCGGGCTGATCTTCCACGGGGCGATGTACGCGCCCCAGGCGGCCTTCT TCTCCGAGATGTTCGCGACCCGGATGCGGTATTCGGGGGCGTCGATCGGCGCGCAGTTCTCATCCGTCGCGGCCGGTGCG CCCGCCCCGCTGATCGCCACCGCGCTCCTGGCCGACTACGACAGCGCCACCCCGATCGCGCTCTATGTGATCGCGGCGGC CCTGCTCACCCTGGTGGCCGTGGGCGTCGCCAAGGAGACCCGGGACCGCGATCTGGCCGCCATCGAACCGACCTCGGCCC CGTCCCCGCGGCCGGCATCGGACGCGGCGGAGCGCACGGCCCGTTCGGCCTCGGCTCAGTAG Protein sequence : MTTPDSPASAPPAPPGSLRRIVAASLIGTTIEWYDFFLYGSAAALVFNKLFFPDSDPLVGTLLSFLTYAVGFAARPVGAL VFGHYGDRLGRKKLLILSLLLMGGATCAIGLLPTHATVGSAAPVLLTALRLIQGFALGGEWGGAVLLVSEHGDPRRRGFW ASWPQTGAPAGQLLATGVLSALTALLSDNAFEAWGWRVPFLLSGVLVLVGLWIRLSVDESPVFKAAQARAEARKAAAGEA TTEKMPLVAVLRHHWRDVLIAMGARMAENISYYVITAFVLVYATSDHVDLGKQTALNAVLIASAVHFAVIPAWGALSDRI GRRPVYLLGAVGVGAWAFPFFLLIDTKGFPALLLAVTVGLIFHGAMYAPQAAFFSEMFATRMRYSGASIGAQFSSVAAGA PAPLIATALLADYDSATPIALYVIAAALLTLVAVGVAKETRDRDLAAIEPTSAPSPRPASDAAERTARSASAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-55 | 42 |
