Gene Information

Name : Rhom172_0115 (Rhom172_0115)
Accession : YP_004823901.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 121099 - 121329 bp
Length : 231 bp
Strand : -
Note : KEGG: rmr:Rmar_0117 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCTCAACGAGGACGCGTCAAGTGGTTCAACATCGACAAAGGCTACGGCTTTATCGAACCCAATGACGGCAGCAAGGA
CGTATTCGTCCACCGCAACAACGTGCCCGGTCTTGGCTGGGACGAAGGGCTTCGCGAAGGCGAAGAGGTTTCCTACGAAG
TCGAGCGCACCCCCAAGGGGCTCAGCGCGATGAACGTCGAACGCCTCTCGCGGTCGTCCGAACTGTTCTGA

Protein sequence :
MAQRGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSAMNVERLSRSSELF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-11 56