Gene Information

Name : Rhom172_0218 (Rhom172_0218)
Accession : YP_004824003.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 230823 - 231110 bp
Length : 288 bp
Strand : +
Note : KEGG: rmr:Rmar_0235 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence : 
ATGGCAGCACGTCGTGGCGTCGTCAAGTGGTTTGACGCAAAAAAGGGGTACGGCTTCATCATCCACCCGGAAGGAGGCGC
CGATATTTTCGTGCACTACTCGCAGATCATCAGCGAGCGGCGCTTCAAGACGTTGCGAACCGGCCAGATCGTCGAGTTCG
AGCTGCACGAAGGCCCCAAAGGGCTCCATGCCCGTAACGTGGTGCCGCTCGACGAAGCGCAGCGAAAGGCGGCCTCGGGC
GAACGCGCTCCCCGGCAGCAACAATCCCATTCGCTGAGCCGCTCCTGA

Protein sequence : 
MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLHARNVVPLDEAQRKAASG
ERAPRQQQSHSLSRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-12 50