Gene Information

Name : Entas_1952 (Entas_1952)
Accession : YP_004828475.1
Strain : Enterobacter asburiae LF7a
Genome accession: NC_015968
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2101436 - 2101957 bp
Length : 522 bp
Strand : -
Note : KEGG: kpu:pK2044_00140 RNA polymerase sigma factor FecI; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGTCTGACCGCGCCACTACCACTGCCTCATTAACGCTCGAGTCGCTTTATGGCTCACATCACGGCTGGCTGAAAAGCTG
GCTGATGCACAAGCTCCGGTCTGCTTTTGATGCAGATGACATTGCCCAGGACACTTTTCTGCGGGTAATGGGCAGCGACA
CGCTCTCGACAATCCGCGATCCTCGCTCATTCCTGTGCACTATCGCCAAACGCGTGATGGTCGATTTATTCCGCCGAAAC
GCGCTGGAAAAAACGTATCTGGAGATGCTGGCGCTTATGCCGGAGGAGATGGCACCTTCTCCCGAAGAACGCGAAAGCCA
GCTCGAAACCCTGCAACTCATCGACACCATGCTTGACGGGCTAAGCGGAAAAACACGCGAAGCGTTTCTGCTTTCGCAAC
TGGATGGTCTGAAATACAGCGAGATCGCGCTGCAACTGGGTGTTTCCGTCAGCTCGGTGAAAAAGTATGTGGCGAAGGCT
ATCGAACATTGTCTGCTGTTTCGTCTGGAGCACGGCCTGTGA

Protein sequence : 
MSDRATTTASLTLESLYGSHHGWLKSWLMHKLRSAFDADDIAQDTFLRVMGSDTLSTIRDPRSFLCTIAKRVMVDLFRRN
ALEKTYLEMLALMPEEMAPSPEERESQLETLQLIDTMLDGLSGKTREAFLLSQLDGLKYSEIALQLGVSVSSVKKYVAKA
IEHCLLFRLEHGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-57 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_1952 YP_004828475.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 9e-58 90