Gene Information

Name : LRC_16710 (LRC_16710)
Accession : YP_004832849.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1730870 - 1732258 bp
Length : 1389 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTGTTTATGGCTGAAGAAATACAACAAGTTGCAGAGATGGTAAATGGATTAATCAAGCGTTCACAACATGCTCA
AGCAATTTTATCAACGTTTACTCAGGAACAAGTTGACAAAATTTGTGAGGCAATCGCAAAAGCCGGTAAAGAACACGCTC
AAGAACTTGCGCAGGCTGCCGTTCAAGAAACGCGTCGTGGCGTCGTGGCTGACAAGGTTACGAAGAATATTTTTGCCAGC
GAATGCATTTGGGAAAGCTTAAAGGATGTAAAGACAGTCGGCGTCGTCAGCGAAGACGAAGACAAGGGTCTTGTTTCAAT
CGCTGAACCAATGGGCGTCATTGCCGGCGTGACTCCTGTGACGAACCCGACTTCAACCGTTATTTTCAAATCTATGATTG
CTCTTAAGACACGCAATACGATTGTCTTTGGGTTCCATCCGCAGGCTCAAAAGAGCTGCGTAATGGCAGGCAAGTTGGTT
GAAGCTGCTGCTGAGGCTGCAGGTGCGCCAAAAGACAGCGTTTTATGGATTGAAGAACCTAGTCTTGAAGCAACGACGGC
TTTGATGCATAATCCAAACGTCAGCTTGATTCTCGCAACGGGCGGTCCAAGCATGGTCAGTGCCGCATATTCTTCCGGCA
AGCCTGCTTTGGGCGTCGGCCCCGGCAACGGTCCGGCTTATGTTGCCGAAAGTGCAAACGTTACAAAGGCAATCGATGAC
ATCGTGACGTCAAAGACCTTTGACAACGGCATGATTTGTGCTTCCGAAAACTCAATCGTCGTTGATGCTTCAATCTATGA
TGAGGTCAAGAAATTGCTCAAGGGTCATGGGGCATACTTCTTGAATGATGAACAAGTGCCTGAATTCAGCAAGGCATTTA
TCGATGAAAAGCGCGGCACTGTTCGCGGTATGTTGGCCGGCAAGAGCGCCAAGGAAATCGCAACGTTGTGCAGCCTTGAA
GTTCCGGCTGACACGCGCATCATCGTTGCAGAACTTGACGGCGTCGGCAGAGAATACCCGCTTTCAGCTGAAAAGCTGTC
ACCTGTTTTGAGCATGTACAAGGCAAAAGATGCCAAGGAAGCTTTCTTCATTTGTCAGCAATTGCTTGATTACGGCGGAC
GCGGTCATACTGCTGCTATCCATTCCGAAGATCATAACCTGATCGTTAAATTTGCCATCGAAATGACGGCTTGCCGCATC
CTGGTCAACACGCCGTCAGCACTTGGCGGCGTTGGCGGTCTTTACAACAACTTGACGCCATCGTTGACGCTTGGCACCGG
GACATACGGCGGCAATGCCGTTTCTCACAACATTACGGCAACGGATCTGCTCAACATGAAGACGGTCGCATTCCGTCACG
AAACGGACTTTTTAAAGAGCTTGAACTAA

Protein sequence :
MDLFMAEEIQQVAEMVNGLIKRSQHAQAILSTFTQEQVDKICEAIAKAGKEHAQELAQAAVQETRRGVVADKVTKNIFAS
ECIWESLKDVKTVGVVSEDEDKGLVSIAEPMGVIAGVTPVTNPTSTVIFKSMIALKTRNTIVFGFHPQAQKSCVMAGKLV
EAAAEAAGAPKDSVLWIEEPSLEATTALMHNPNVSLILATGGPSMVSAAYSSGKPALGVGPGNGPAYVAESANVTKAIDD
IVTSKTFDNGMICASENSIVVDASIYDEVKKLLKGHGAYFLNDEQVPEFSKAFIDEKRGTVRGMLAGKSAKEIATLCSLE
VPADTRIIVAELDGVGREYPLSAEKLSPVLSMYKAKDAKEAFFICQQLLDYGGRGHTAAIHSEDHNLIVKFAIEMTACRI
LVNTPSALGGVGGLYNNLTPSLTLGTGTYGGNAVSHNITATDLLNMKTVAFRHETDFLKSLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 6e-75 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRC_16710 YP_004832849.1 NAD-dependent aldehyde dehydrogenase VFG1595 Protein 3e-75 45