Gene Information

Name : ccmC (SLG_16120)
Accession : YP_004834744.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1767650 - 1768375 bp
Length : 726 bp
Strand : +
Note : protein synonym:heme exporter protein C

DNA sequence :
ATGCACGCCTTCGCCAACCCACGCCGATTCCTGGCCATCGCGATGCCCCTGACGCCCTGGTGCTTCTGGGGCGGGATCGC
GTTGATCCTCGCCGGATGCTGGGCCGGCCTGTTCCGCGCTCCGGCGGACTATCTGCAGGGCGAGAGCTTCCGCATCATCT
ATATTCATGTGCCGACCGCCTGGCTGGGCATGGGCGGCTGGAGCGGCATGACCATCGCGGCGATCATGCAGCTGGTCTGG
CGGCACCCGCTCGCGGGGATCGCCGGAAAGGCCATCGCCGTGCCCGGGGCCGTGGCGACGGCGCTGTGTCTCGCCACCGG
ATCGATCTGGGGCCGGCCGACCTGGGGAACATGGTGGGAATGGGACGGGCGCATGACGTCCATGCTCCTGCTGCTCTTTC
TCTATATCGGCTATATCGCTCTGGCCCGATCCAGCGCGGATCGCGGCGATGCGGGCGGGGTGAGCCGGGTCACGGCCATC
TACGCGCTGGTCGGCGCGCTCAACCTGCCGATCATCCATTATTCGGTGGTCTGGTGGAACAGCCTGCATCAGGGGCGGAG
CATCACTCTGTCCGGCAGCAGCATCGCGGGTTCGATGCTCTGGCCGCTGGGCCTGACGGTGGTCGGCTTCACGGCCTGGT
TCGCGGCGATCGTGCTGCTGCGCATGCGCGCAATCCTCGCCGAGAACCGCATAGAGGCGCGGCTGCGCCGCATGTCCCGG
AGTTGA

Protein sequence :
MHAFANPRRFLAIAMPLTPWCFWGGIALILAGCWAGLFRAPADYLQGESFRIIYIHVPTAWLGMGGWSGMTIAAIMQLVW
RHPLAGIAGKAIAVPGAVATALCLATGSIWGRPTWGTWWEWDGRMTSMLLLLFLYIGYIALARSSADRGDAGGVSRVTAI
YALVGALNLPIIHYSVVWWNSLHQGRSITLSGSSIAGSMLWPLGLTVVGFTAWFAAIVLLRMRAILAENRIEARLRRMSR
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 7e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_004834744.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 2e-30 41