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Name : glcD (SLG_34810) Accession : YP_004836613.1 Strain : Sphingobium sp. SYK-6 Genome accession: NC_015976 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3762644 - 3764125 bp Length : 1482 bp Strand : - Note : - DNA sequence : ATGCCCGAACCGGACGGCGCCGTGCTCGCGCGTCGCACGCAGATCGCGGCGTCGTTGCGCGCGCTGGTGCCGGGCGTGCG CGTCATCGATCATCCGGACGAGCTGCGTCCCTATGAATGTGACGGGCTCACCGCCTATCGCCAGCCGCCGATGCTCGTGG TGCTGCCGGAGACGACGGCGCAGGTTTCGCGCATCCTTGGCTGGTGCCAGGCGGAAGGCGTCAAGGTCGTGCCGCGCGGG GCGGGCACGTCCCTCTCGGGCGGTGCGCTGCCTCTCGCCGACTGCGTGCTGCTTTCGCTGGCGCGCTTCAATCGGATCCT GTCGGTGGACTATGATGATCGCCTCGCCATCGTGCAGCCGGGCGTCACCAATCTTGCCGTGACGCAGGCGGTGGAGGACC GGGGCTTCTATTACGCGCCCGACCCGTCGAGCCAGATCGCCTGTTCGATCGGCGGCAATGTCGCGGAGAATTCGGGGGGC GTGCACTGCCTGAAATATGGGCTGACGACCAACAATGTGCTGGGCGTGGAACTGGTGCTGATGAGCGGTGAGATCGTGCG CCTCGGCGGGACGACGCTCGATTCGCCGGGGCTCGACCTGCTGGGACTGGTGGTGGGCTCCGAGGGGCTGCTCGGCGTCG TCACCGAGGTGACGGTGCGGATACTGCCGAAGGCGGATGCGGCACGTGCGCTGCTCATCGGTTTCGCGGCGGTCGAGGAT GCCGGCGCCTGCGTGGCGGCGATCATCAGCCATGGCATCATCCCCGCCGGCATGGAGATGATGGATCGCATTGCCATCCA TGCCGCCGAGGCCTTCGTCCATGCCGGCTATCCGCTCGATGTCGAGGCGCTGCTGATCGTGGAGCTGGATGGACCGGAAG CGGAGTGCGGCTTTCTCGTCGGCGAGGTGGAGCGGATCGCGCGGGCCAATGGCGCCGTGCTGCTGCGCACGTCCGGCAGC GAGGCGGAGCGCAATCTCTTCTGGGCGGGGCGGAAAGCAGCCTTCCCCGCCGTGGGCCGCGTCTCGCCGGATTATTATTG CATGGACGGCACCATTCCCCGCCGTCGCCTGCCCGAAGTGCTCAGCCGGATGGCCGCGCTTTCCGAGCAATATGGGCTGG GCGTGGCCAATGTCTTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTCTATGATGCGAGCAGACCGGGCGATCTC GAAAAGGCCGAGGCATTCGGCGCGGACATCCTGCGCCTGTGCGTGGAGGTGGGCGGCGTGCTGACCGGGGAACATGGTGT GGGCGTGGAGAAGCGCGACCTCATGCCCGAGATGTTCACGGCGCTGGATCTCGACCAGCAGCAGCGAATGAAATGCGCTT TCGACCCCGGGCAATTGCTCAATCCCGGCAAGGTCTTCCCTACACTGCATCGCTGCGCGGAGCTGGGGCGGATGCATGTG CACCGCGGCGCTCTGCCTTTCCCTGAACTCCCCCGCTTCTGA Protein sequence : MPEPDGAVLARRTQIAASLRALVPGVRVIDHPDELRPYECDGLTAYRQPPMLVVLPETTAQVSRILGWCQAEGVKVVPRG AGTSLSGGALPLADCVLLSLARFNRILSVDYDDRLAIVQPGVTNLAVTQAVEDRGFYYAPDPSSQIACSIGGNVAENSGG VHCLKYGLTTNNVLGVELVLMSGEIVRLGGTTLDSPGLDLLGLVVGSEGLLGVVTEVTVRILPKADAARALLIGFAAVED AGACVAAIISHGIIPAGMEMMDRIAIHAAEAFVHAGYPLDVEALLIVELDGPEAECGFLVGEVERIARANGAVLLRTSGS EAERNLFWAGRKAAFPAVGRVSPDYYCMDGTIPRRRLPEVLSRMAALSEQYGLGVANVFHAGDGNLHPLILYDASRPGDL EKAEAFGADILRLCVEVGGVLTGEHGVGVEKRDLMPEMFTALDLDQQQRMKCAFDPGQLLNPGKVFPTLHRCAELGRMHV HRGALPFPELPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-120 | 60 |
