Gene Information

Name : rnhA (SLG_05680)
Accession : YP_004833700.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 591731 - 592189 bp
Length : 459 bp
Strand : -
Note : protein synonym:RNase H

DNA sequence :
ATGACGCAGACGGTCCAGCTCTTCACGGATGGCGCCTGCAAGGGCAATCCCGGGCCCGGCGGCTGGGGCGCAGTGCTGCG
CTTCAACGGCCATGAGAAGGAACTGTCCGGCGGGGAGGTCCACACCACCAACAACCGCATGGAACTGATGGCCGCCATCG
AGGGTCTGAAAGCCCTCACGCGCCCCTGCCATGTGATCCTTTCCACCGACAGCAATTATGTGAAGGACGGCATCACCCGC
TGGATTCACGGCTGGCAGCGCAATGGGTGGCGCACGGCCGACAAGAAGCCGGTCAAGAATGCGGACCTGTGGCAAGCGTT
GCTGGAAGCGAGCGGGCGGCACCGGGTCGACTGGCGCTGGGTGAAAGGCCATGCCGGCCATCCCGAAAACGAGCGCGCCG
ACCGGCTGGCGAGCGCGGCGGCCGAAGCCGCGCGGCGGGTTCCGCAGCAACAGCTTTAG

Protein sequence :
MTQTVQLFTDGACKGNPGPGGWGAVLRFNGHEKELSGGEVHTTNNRMELMAAIEGLKALTRPCHVILSTDSNYVKDGITR
WIHGWQRNGWRTADKKPVKNADLWQALLEASGRHRVDWRWVKGHAGHPENERADRLASAAAEAARRVPQQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-40 65