Gene Information

Name : LSA_R00820 (LSA_R00820)
Accession : -
Strain : Lactobacillus sanfranciscensis TMW 1.1304
Genome accession: NC_015978
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279132 - 1280701 bp
Length : 1570 bp
Strand : -
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGGACGAACGTTGGCGGCGTGCCTAATACATGCAAGTCGAACGAAGTCGCCCAATTGATTCT
TAGTGCTTGCACTAAGATGATTTTGGATCCGACTGAGTGGCGAACTGGTGAGTAACACGTGGGTAACCTGCCCAGAAGAA
GGGGATAACACCTGGAAACAGATGCTAATACCGTATAACAACAAGAACCACATGGTTCTTGTTTGAAAGCTGGCCTTTGT
GCTAGTGCTTCTGGATGGACCCGCGGCGTATTAGCTAGTTGGTGAGATAATAGCTCACCAAGGCAATGATACGTAGCAGA
CCTGAGAGGGTAATCTGCCACAATGGGACTGAGACACGGCCCATACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACA
ATGGACGAAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGGTTTCGGCTCGTAAAACTCTGTTGTTAGAGAAGAAC
AGCCGTGAGAGCAACTGCTCACGGTATGACGGTATCTAACCAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAA
TACGTAGGTGGCAAACGTTGTCCGGATTTATTGGGCGTAAAGGGAGCGCAGGCGGTTTATTAAGTCTGATGTGAAAGCCT
TCGGCTTAACCGGAGAAGTGCATCGGAAACTGATAAACTTGAGTGCAGAAAAGGATAGTGGAACTTCATGTGTAGCGGTG
AAATGCGTAGATATATGAAGGAACACCAGTGGCGAAGGCGGCTATCTGGTCTGTAACTGACGCTGAGGCTCGAAAGCATG
GGTAGCAAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAATGCTAGGTGTTGGAAGGTTTCCGCCTTTCA
GTGCCGCAGCTAACGCATTAAGCATTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCC
GCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCTACGCGAAGAACCTTACCAGGACTTGACATCTTCTGCCAATCTAA
GAGATTAGACGTTCCCTTCGGGGACAGAATGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTA
AGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTTGCCAGCATTAAGTTGGGCACTCTAGAGAGACTGCCGGTGATAAACC
GGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTCCTGGGCTACACACGTGCTACAATGGGCGATACAACG
AGTTGCGAAACCGCGAGGTCAAGCTAATCTCTTAAAGTCGTTCTCAGTTCGGATTGCAGTCTGCAACTCGACTGCATGAA
GTTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCA
TGAGAGTTTGTAACACCCAAAGTCGGTTGGATAACCTTTTAGGAGTCCGCCGCCTAAGGTGGGACAGATGATTAGGGTGA
AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-235 84
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-235 84
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-235 81.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-235 81.4
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-236 81.4
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-236 81.4