Name : clpB (FBFL15_0253) Accession : YP_004842628.1 Strain : Flavobacterium branchiophilum FL-15 Genome accession: NC_016001 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 292623 - 295226 bp Length : 2604 bp Strand : - Note : - DNA sequence : ATGAACATTAATAAATTTACAACCAAATCGCAGGAAGCCATCCAACTTTCGCAACAAATTGTGCAAAGTGTGGGGCAACA ACAAATAGAAAATGAGCATATTTTCAAAGCACTTTTAGAAGTGGATGAAAATGTAACGCCTTTTTTATTAAAAAAATTGA ATGTGAATGTGCCGCTTTTCAAACAAATCTTGGAAAGTACCATTCAAAGTTTTCCAAAAGTTTCCGGTGGCGAAATCATG CTATCCAGAACCGCTAATTCGACTCTGAACGAGGCCGAAATTTTGGCTGGAAAAATGAACGACGAATTTGTTTCGGTAGA ACATTTGGTACTCGCTATTTTTGGGTCGAAAACTAAAGTAGCCCAAATTTTAAAAGACCAAGGCGTTACCGAAAAAAGTC TAAAATCGACAATTGAGGAAATGAGAAAAGGCGAAAGAGTAACCTCTGCCTCTGCCGAAGAAACTTATAACGCCTTAAAC AAATACGCCAAAAACCTCAACGATTTAGCCCGAAGCGGCAAATTAGACCCTGTTATTGGTCGTGACGAGGAAATTCGTCG TGTGTTGCAAATTCTAACCCGTAGAACCAAAAACAACCCCATGTTGGTGGGTGAACCTGGTGTGGGTAAAACCGCCATTG CCGAAGGTTTAGCACACCGAATTGTAGATGGTGATGTACCCGAAAACCTAAAAGACAAAATTATCTTCTCCCTTGATATG GGCGCTTTGATTGCGGGTGCCAAATACAAAGGCGAATTTGAAGAACGTTTGAAATCGGTAGTGAAAGAAGTAACTGCTGC CGAAGGCGACATTGTCCTTTTCATTGACGAAATCCACACTTTAGTGGGTGCTGGCGGTGGCGAAGGGGCGATGGATGCGG CTAATATTTTGAAACCTGCTTTGGCACGTGGCGAGTTGCGTGCCATTGGAGCAACCACTTTGGACGAATACCAAAAATAT TTTGAAAAAGACAAAGCCCTTGAAAGACGTTTCCAAAAAGTACTAGTCGAAGAACCCGATACCGAAAGTGCTATTTCTAT CTTGCGTGGCATTAAAGAAAAATACGAAACGCACCACAAGGTACAAATCAAAGACGAGGCCATTATTGCAGCGGTTGAAT TGTCGCAGCGTTATATTACCAATCGTTTTTTACCTGATAAAGCCATCGATTTAATGGACGAAGCGGCTTCAAAATTGCGA ATGGAAATCAATTCAAAACCCGAAGAATTAGACGTTTTGGATCGAAAAATCATGCAATTGGAAATTGAAATTGAAGCTAT CAAACGGGAGAAAGACGAAAGCAAGTTGAAAGTTTTGGGCATGGAATTGGCGAACTTGAAAGAAGACCGCAACGAGATTT ATGCCAAATGGAAATCGGAAAAAGATGTGGTGGACAACATTCAAGCCGTGAAAACCGAAATTGAAGATTTCAAATACGAA GCCGAGCGTGCAGAACGGGATGGAGATTACGGAAAAGTAGCTGAAATTCGGTATGGAAAAATCAAAGAAGCTCAAGAACG TTTGGATGTTTTGGTGAAACAAATACAAGAAAATCAAGCAGGAACATCTTTGATTAAAGAAGTTGTTACCCGAGAAGATA TTGCCGAAGTTGTGGCTAAATGGACTGGAATTCCAGTAACCAAAATGCTCCAAGGAGAAAGAGAAAAACTCTTGAAATTG GAAGACGAATTACACAAACGTGTGGTGGGACAAGAAGAAGCCATTGAAGCCGTAAGTGATGCCGTTCGTAGAAGTCGTGC GGGTTTGCAAGACATGAAAAAACCTGTGGGTACCTTCCTTTTCTTAGGAACAACTGGAGTGGGTAAAACCGAATTGGCGA AAGCCCTAGCTGAATATTTGTTTGACGATGAAAATGCCATGACCCGAATTGACATGAGCGAATACCAAGAACGTCATTCG GTGAGTCGTTTGGTGGGTGCTCCTCCAGGCTATGTGGGCTATGACGAAGGTGGGCAATTGACCGAGGCGGTGCGAAGAAA ACCCTACTCTGTGATTTTGTTGGACGAAATTGAAAAAGCCCATCCAGATACCTTTAATATCTTGTTGCAGGTGCTAGACG AAGGCCGTTTGACGGATAACAAAGGCCGCTTGGCCGACTTCAAAAACACGATTATCATCATGACCTCGAATATGGGTAGC CAAATTATTCAAGATACTTTTGAAAACTTGAAAGGCAGTGTTGAAGCGGCTACAGAAGCTGCCAAAGTGGAGGTTTTAGG TTTATTGAAACAAACGGTGCGACCTGAATTCATCAATCGAATTGACGAAATTGTGATGTTTACCCCATTAACAAATGCTA ATATTGCACAAATCGTAGGTTTACAATTGAAATCGGTTACTAAAATGCTAGCACAACAAGGCATCACTATGGACGCTACA CCCGAAGCCATTCAGTATTTGTCTCAAAAAGGATATGATCCACAATTTGGAGCAAGACCTGTAAAAAGAGTGATTCAAAG GGAAGTACTGAACCAATTATCTAAAGAAATATTGGCAGGACAAATCAAAACGGACAGTATCATTTTGTTGGATGCGTTTG ACAGCCAATTGGTTTTTAGAAATCAAGGGGCAGTTTTGAGTTAA Protein sequence : MNINKFTTKSQEAIQLSQQIVQSVGQQQIENEHIFKALLEVDENVTPFLLKKLNVNVPLFKQILESTIQSFPKVSGGEIM LSRTANSTLNEAEILAGKMNDEFVSVEHLVLAIFGSKTKVAQILKDQGVTEKSLKSTIEEMRKGERVTSASAEETYNALN KYAKNLNDLARSGKLDPVIGRDEEIRRVLQILTRRTKNNPMLVGEPGVGKTAIAEGLAHRIVDGDVPENLKDKIIFSLDM GALIAGAKYKGEFEERLKSVVKEVTAAEGDIVLFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLDEYQKY FEKDKALERRFQKVLVEEPDTESAISILRGIKEKYETHHKVQIKDEAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLR MEINSKPEELDVLDRKIMQLEIEIEAIKREKDESKLKVLGMELANLKEDRNEIYAKWKSEKDVVDNIQAVKTEIEDFKYE AERAERDGDYGKVAEIRYGKIKEAQERLDVLVKQIQENQAGTSLIKEVVTREDIAEVVAKWTGIPVTKMLQGEREKLLKL EDELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGTFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHS VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS QIIQDTFENLKGSVEAATEAAKVEVLGLLKQTVRPEFINRIDEIVMFTPLTNANIAQIVGLQLKSVTKMLAQQGITMDAT PEAIQYLSQKGYDPQFGARPVKRVIQREVLNQLSKEILAGQIKTDSIILLDAFDSQLVFRNQGAVLS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-92 | 41 |
aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-92 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpB | YP_004842628.1 | ATPase with chaperone activity ATP-binding subunit | VFG2076 | Protein | 1e-109 | 44 |
clpB | YP_004842628.1 | ATPase with chaperone activity ATP-binding subunit | VFG2084 | Protein | 2e-95 | 43 |