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Name : secD (NH8B_1295) Accession : YP_004846535.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1323004 - 1324845 bp Length : 1842 bp Strand : - Note : - DNA sequence : ATGAACCGCTATCCACTCTGGAAATACTTCATCATCGTGGTAGCGCTGGTCGTCTCGACGATCTATACGCTGCCCAATTT CTTCGGCGAAACCCCTGCCGTCCAGATTTCCAGCTCGCGTCAGTCCATTCCGGTGGACACCGCGCTGATGGGCCGCGTCG AAGCCGCGTTGACCGCCCAGCACATTACCCCGGACGGCTTGTTTCTGGACGGCAATAGCCTGAAGGTCCGTTTCCACGAC CCGGACACCCAGATCAAGGGGCGCGACGCCATCCAGCAGGCGCTGGGTGACAACTACATCATCGCGCTCAACCTGCTGGC GGCCTCGCCCGACTGGCTCACCAAGCTCAAGGCCTACCCGATGTTCCTGGGGCTGGACTTGCGTGGCGGCGTTCACTTCC TGCTCGAAGTGGACATGAAGGCAGCCACCGACAAGACCATGGAGCGCTACGCCGGCGATATCCGTCGCGAATTCAAGGAC AAGAAGGTCCGCTACGGTACCATCAAGCGCAATGGCAACACGCTGGAAGTGCAGCTGCGCGACGCGGCCACGCTGAAGGC AGCCGAAGACGCCGTGGCCCGCGCCCTGCCCTCGCTGAGCTTTACCAGCGACGACAACAGCTACAAGCTGAGCCTGACGC TGAAGCCGGAGGAGATCACCCGCATCCAGAGCGATGCAGTGAAGCAGAACATCACCACGCTGCACAACCGTGTCAACGAA CTGGGTGTCGCCGAGCCGATCATCCAGCAATCCGGCGCCAACCGCATCGTGGTGCAGCTGCCGGGCGTGCAGGACACCGC CAAGGCCAAGGACATTCTGGGTCGTACCGCCACGCTGGAAGTGCGCATGGTGTCCGACGATCAGAGCATGGTGGCCGAGG CACTGGCCGGCAACGTACCGGGTGGCTACGAACTGCTGGACGAGCTGACTCCACGCGGCCCGCAGAAGATACTGGTAAGC AAAGAGGTCGAGCTGACCGGCGACAACATCAACGACGCCCAGCCGGGCTTCGACGAGAACGGCACGCCGGCGGTGCACAT CAATCTCGACTCCACCGGGGCCTCGATCTTCCGCCAGGTGACGGCTGAGAACATCGGCAAGCGCATGGCGATGGTGCTGG TGGAAAAAGGCCGCGCCGAAGTGGTGACCGCGCCGGTGATCCGCAGCGAGATCGGCGGCGGCCGGGTGCAGATTTCCGGC AGCATGAACGCCGCCGAAGCCAACGATACCGCGCTGCTGCTGCGCGCCGGCTCGCTGGCCGCCCCAATGAACATCATCGA GGAGCGCACCGTCGGCCCGAGCCTGGGCAAGGAGAACATCGAGAAGGGCTTCCACTCCACGCTGTGGGGTTTTGCCGTCA TCGCCGTGTTCATGCTGATCTACTACCGCGTGTTCGGCCTGATCTCGGCGCTGTCGCTGGGGGTGAACCTGTTCATGCTG GTGGCGGTGCTGTCGATGCTGCAGGCGACGCTGACCCTGCCCGGCATCGCAGCCATCGCACTGACGCTGGGCATGGCGAT CGACGCCAACGTGCTGATCAACGAGCGCATCCGCGAGGAGCTGCGTAACGGCGTGCCGCCGCACTCCGCGATCCAGGCCG GTTACCAGCATGCCTGGGCCACGATTCTCGACTCCAACATCACCACGCTGATCGCCGGCCTCGCGCTCTTGATCTTCGGT TCGGGCCCGGTGCGCGGCTTTGCCGTGGTGCATTGCCTGGGGATTATGACCTCGATGTTCTCGGCGGTCCTGGTGTCGCG CGGCTTCGTCAACCTGTGGTACGGCCGCAAGCGGCGCCTGGCCACGGTGTCGATCGGCCAGGTCTGGAAACCTGAATCGT AA Protein sequence : MNRYPLWKYFIIVVALVVSTIYTLPNFFGETPAVQISSSRQSIPVDTALMGRVEAALTAQHITPDGLFLDGNSLKVRFHD PDTQIKGRDAIQQALGDNYIIALNLLAASPDWLTKLKAYPMFLGLDLRGGVHFLLEVDMKAATDKTMERYAGDIRREFKD KKVRYGTIKRNGNTLEVQLRDAATLKAAEDAVARALPSLSFTSDDNSYKLSLTLKPEEITRIQSDAVKQNITTLHNRVNE LGVAEPIIQQSGANRIVVQLPGVQDTAKAKDILGRTATLEVRMVSDDQSMVAEALAGNVPGGYELLDELTPRGPQKILVS KEVELTGDNINDAQPGFDENGTPAVHINLDSTGASIFRQVTAENIGKRMAMVLVEKGRAEVVTAPVIRSEIGGGRVQISG SMNAAEANDTALLLRAGSLAAPMNIIEERTVGPSLGKENIEKGFHSTLWGFAVIAVFMLIYYRVFGLISALSLGVNLFML VAVLSMLQATLTLPGIAAIALTLGMAIDANVLINERIREELRNGVPPHSAIQAGYQHAWATILDSNITTLIAGLALLIFG SGPVRGFAVVHCLGIMTSMFSAVLVSRGFVNLWYGRKRRLATVSIGQVWKPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-105 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-105 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-105 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-105 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-105 | 43 |
