Gene Information

Name : NH8B_3065 (NH8B_3065)
Accession : YP_004848265.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3241082 - 3241789 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAAGGTATTGCGTTGTCACGATCTGACCAAGGTCTACGACGAGGGCGGGCTGAACGTCCAGGTGCTGTCGAAGGT
GACGCTGGAGGTGGAAAAGGGCGAGCGGCTGGCTATCGTCGGAGCCTCCGGCTCGGGCAAGAGTACCTTGCTGCACCTGT
TGGGCGGGCTCGATACCCCGAGTTCGGGCGAGATCGAGGTGCTGGGGCAATCGCTGTCGCGCCTGAGCGAGCGCCAGCGT
GGCGAGTTGCGCAACCGTTCGCTCGGTTTCGTCTATCAGTTCCACCACCTGCTGCCGGAATTTACCGCGCTGGAAAACGT
CATGATGCCGCTTTTGATCCGGCGCATGCCGCGTGCCGAGGCGGAGCAGCAGGCGGCGGAGATGCTGGGCCGCGTCGGCC
TGTCGCGCCGTCTGGCGCACAAGCCGGGCGAGTTGTCCGGCGGCGAGCGGCAGCGCGCCGCCATCGCCCGCGCGCTGGTG
ACGCGGCCGGCCTGCGTGCTGGCCGACGAGCCGACCGGCAACCTCGACCGGGGCAACGCCGACGCGGTGTTCGAATTGAT
GCTGGAGCTGAACGCCAGCCTTGGCACCAGCCTGGTGATCGTCACCCACGACGACCGCCTGGCGAGCCGCGCCGGGCGCG
TGCTGCGCCTGACCGACGGCGTGCTGTCGGTCGATGCGCCGCAACCGGCTCTCTCTGTCACCCATTAA

Protein sequence : 
MNKVLRCHDLTKVYDEGGLNVQVLSKVTLEVEKGERLAIVGASGSGKSTLLHLLGGLDTPSSGEIEVLGQSLSRLSERQR
GELRNRSLGFVYQFHHLLPEFTALENVMMPLLIRRMPRAEAEQQAAEMLGRVGLSRRLAHKPGELSGGERQRAAIARALV
TRPACVLADEPTGNLDRGNADAVFELMLELNASLGTSLVIVTHDDRLASRAGRVLRLTDGVLSVDAPQPALSVTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_3065 YP_004848265.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-34 47
NH8B_3065 YP_004848265.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 1e-38 43
NH8B_3065 YP_004848265.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686946. Protein 4e-25 41