Gene Information

Name : rrn16S_1 (NH8B_0439)
Accession : -
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 457528 - 459051 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGTAACAGGGGCTTCGGCCC
GCTGACGAGTGGCGAACGGGTGAGTAATGCGTCGGAACGCACCGAGTAATGGGGGATAACGCAGCGAAAGCTGTGCTAAT
ACCGCATACGCTCCGAGGAGGAAAGCAGGGGATCGTAAGACCTTGCGTTATTCGAGCGGCCGACGTCTGATTAGCTAGTT
GGTGGGGTAAAGGCTCACCAAGGCGACGATCAGTAGCGGGTCTGAGAGGATGATCCGCCACACTGGGACTGAGACACGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGTCTGAAG
AAGGCCTTCGGGTTGTAAAGGACTTTTGTCCGGGAGCAAATGCCGGTGGCTAATATCCACTGGAGCTGAGAGTACCGGAA
GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA
AGCGTGCGCAGGCGGTTGTGTAAGTCTGATGTGAAAGCCCCGGGCTCAACCTGGGAACGGCATTGGAGACTGCACAGCTA
GAGTGCGTCAGAGGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCA
GTCCCCTGGGATGACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCT
AAACGATGTCAATTAGCTGTTGGGGGTTTGAATCCTTGGTAGCGTAGCTAACGCGTGAAATTGACCGCCTGGGGAGTACG
GCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGA
AAAACCTTACCTGCTCTTGACATGTCCGGAACCTCGCAGAGACGCGAGGGTGCCCGAAAGGGAGCCGGAACACAGGTGCT
GCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCATC
ATTTAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTA
TGAGCAGGGCTTCACACGTCATACAATGGTCGGTACAGAGGGTCGCCAAGCCGCGAGGTGGAGCCAATCTCATAAAACCG
ATCGTAGTCCGGATCGCACTCTGCAACTCGAGTGCGTGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATGCTGCGGTG
AATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGGATACCAGAAGTGGCTAGGATAACCTTCG
GGAGTCCGGTTACCACGGTATGCTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC
ACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-167 88
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-167 88
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-167 86.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-167 86.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-167 86.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-167 86.7