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Name : secD (XACM_2491) Accession : YP_004852049.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2848016 - 2849860 bp Length : 1845 bp Strand : - Note : COG0342; U Intracellular trafficking, secretion, and vesicular transport DNA sequence : ATGCTCGAATTTCCTCGCTGGAAGTACTTCCTGATCCTGCTGGTACTGGCCGTCAGCGCGCTGTATGCGTTGCCCAACGT GTACCAGAAGGACCCGTCCGTGCAGATCACCGCCAGCCGCGGTGCGCAGCTCGACGACGCATTGCGCAGCCGCATCGACG GTGAGCTCAAGAGCGCCGGCATCACCCCGAAGGCGATCACAAAAGAAGGCGACAGCCTGATGGTGCGGTTGCCTTCGCTG CAGGCGCAGACACGCGCCAACGACGTGTTGCGTCAGCAGCTGGGCGAGAACTACACCGTGGCGCTGAACCTGGCCTCCAC CGTGCCGGACTGGCTGGCCAAGCTGGGCGGCCGGCCGATGGTGCTGGGTCTGGACCTGGTGGGCGGCGTGCACTTCGCCA TGCAGGTCGACCAGAAGGCCGCGCTGGAAAAGCGCCTGGACGGGTTTGCCGAAGACATCCGCACCACCTTGCGCGATGCG CGTATCCCGTATCGCTCGGTGGAACGTCGCGCCGACAACAGTATCCAGGTCAACCTGGGCGAGGGCGCCAATGCCGACGC CGCGCGCGTGACGCTGGCCAAGGCGCAGCCGACCCTGACCTACGACGTCAGCGGCCAGAACATCGCCGTGAAGGTGCCGG AGGCCGAGCTCAAGCAGATCGCCAGCGGTGCGATCGAGCAGAACCTCACCACCTTGCGCAACCGCGTCAACGCACTGGGC GTGTCCGAGCCGACCATCCAGCGCCAGGGCGAGGACCGCATCGTGGTCGAACTGCCCGGTCTGCAGGACACCGCCGAAGC CAAGCGCCTGATCGGTGCCACCGCCTCGCTGGAATTCCGCGCCGTGGTCGACGGTAATGCCGACGATGCCGTGCGCAGCG GCAACATTCCGCCGGAGGCCAAGGTCTATCGCCTGCGCGACAGCAACGCGCCGGTGTTGTTGAACAAGCGCGCGCTGGTG ACCGGCGACCAGATGGTCAGCGCATCGGTCAGCACCGACCAGAACGGCATGCCGGCAGTGGCGGTGACGCTCAACAACGT CGCCGGCCAGCGCATGTTCGACTACACCAGCGCCAACGTCGGCAAGCTGATGTCGGTGGTCTACATCGAGCGCATTCCCA CCGTGACCATGGTCGACGGCAAGGAAGTGCGCAGCGTACGGGTCAAGGAAGAAGCCTTGTCGCCGACCCGCATTGCCGGC GTGTTCGGCAAGAACTTCCAGACCACCGGTCTGGAAAAGACCGAAGCCGAGAACCTGGCCAAGCTGCTGAAATCCGGCTC GCTGGCCGCGCCCATGGACTTCGTCGAGGAATACGTCATCGGACCGAGCCTGGGTGCGGAGAACGTGGAGCGCGGCGTCA CGGCGGTGGTCTACTCGTTCCTGTTTACGCTGGTGTTCTTCACCATCTACTACCGCGTGTTCGGCGCGATCACCTCGGTG GCGCTGCTGTTCAACCTGCTGATCGTGGTGGCGGTGATGTCGCTGTTCGGTGCCACCATGACGTTGCCGGGCTTTGCTGG CCTGGCGCTGTCGGTCGGTCTGTCGGTGGACGCCAACGTGCTGATCAACGAGCGTATCCGCGAAGAGTTGCGCCTGGGCG TACCGGCCAAATCGGCGATCGCGGCCGGTTACGAAAAGGCCGGCGGCACCATCCTCGACGCCAACCTTACCGGCCTGATC GTGGCGGTGGCGTTGTATGCGTTCGGTACCGGCCCGCTGAAGGGCTTCGCGCTGACCATGATGATCGGTATTTTCGCCTC GATGTTCACCGCGATCACGGTCTCGCGTGCGCTGGCGGTGTTGATCTACGGCAGCCGCAAGAAGCTGAAGTCTGTCGCTA TTTAA Protein sequence : MLEFPRWKYFLILLVLAVSALYALPNVYQKDPSVQITASRGAQLDDALRSRIDGELKSAGITPKAITKEGDSLMVRLPSL QAQTRANDVLRQQLGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFAMQVDQKAALEKRLDGFAEDIRTTLRDA RIPYRSVERRADNSIQVNLGEGANADAARVTLAKAQPTLTYDVSGQNIAVKVPEAELKQIASGAIEQNLTTLRNRVNALG VSEPTIQRQGEDRIVVELPGLQDTAEAKRLIGATASLEFRAVVDGNADDAVRSGNIPPEAKVYRLRDSNAPVLLNKRALV TGDQMVSASVSTDQNGMPAVAVTLNNVAGQRMFDYTSANVGKLMSVVYIERIPTVTMVDGKEVRSVRVKEEALSPTRIAG VFGKNFQTTGLEKTEAENLAKLLKSGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVYSFLFTLVFFTIYYRVFGAITSV ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRLGVPAKSAIAAGYEKAGGTILDANLTGLI VAVALYAFGTGPLKGFALTMMIGIFASMFTAITVSRALAVLIYGSRKKLKSVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-107 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-108 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-108 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-108 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-108 | 45 |
