Gene Information

Name : XACM_4010 (XACM_4010)
Accession : YP_004853544.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 4643442 - 4645325 bp
Length : 1884 bp
Strand : -
Note : COG3519; S Function unknown

DNA sequence :
ATGGACCCGCGCCTGCTGCCGTACTACACCCGCGAATTGCAGCACGTGCGCGACATGGGCGCGGAGTTTGCGCGCGAGTA
TCCCAAGATCGCCGGACGGCTCGGTCTGGACGCGTTCGAATGTGCCGACCCGTATGTCGAGCGGTTGCTGGAAGGCTTCG
CGTTCCTGGCCGCGCGCGTGCAACTCAAGCTGGACGCGCAGTACCCCGTGTTCACCCAGCACCTGCTGGAGATGGTCTAC
CCGCATTATCTGGCGCCGCTGCCGTCGATGGCGGTGGTGCAGTTGCAGCCGGATCTGAAAGACAGCGGGCTGGCAGCAGG
CGTGGTGGTGCCGCGGCAAAGTGCGCTGCGCAGCCTGGTCGGCCCGGGCGAGCGCACCGCCTGCGAATTTCGCACCGCGC
ATGCAGTGAGCTTGTGGCCGTTGCAGCTGGCCGAGGTCAAGTATCTTGAATCGCCGGCCGCGTTGGCGGCTGCCGGCATC
GCCTTGCCGGCCGGGCGCGTGGTGCGTGCCGGCGTGCGTCTGCGCTTTGAGCTGGTGGGTGGTGCGCAGACGCAAGCGCT
GGCGCTGGATCGGCTGCCGCTGTTTCTGGCCGGCGCCGACGGCTTGCCCAAGCGCCTTTACGAACAACTGCATGCCGATA
CCACCGCCGTGGTGGTGCGTGGCAGTAATGCCAGCGGTGGCATGCTGGAGATGACGCTGGGCGCCGATACCGTGCAGATG
CGCGGCTTTGCCGATGACGATGCATTGATTCCGTACGACGGCCGTTCGTTCAGTGGTTACCGCCTGCTGCAGGAATACTT
CGCCTGTCCGGAGCGCTTTCTGTTCGCAGAACTCACCGGGCTGCGCGCGCCATTGCGGCGGTTGCACGGCAGCAGCTTCG
AGGTGGTGGTGTTGCTGCAACGCAGCCTGCCGAGCCTGGCTGCGGCAGTGGGCGCCGAGCATTTCAAATTGTTCTGCACC
CCGGCAATCAATCTGTTCCCACGGCGTGCCGATCGCATCCATCTGCACGCCGGCCTGCACGAATACCACGTGCTGGCCGA
CCGCACCCGGCCGATGGATTTCGAGGTCCATCATTTGGGCGAAGTGGAAGGCTTCGGCGATCGTCAGGAGCCGGAGCAAC
GCTTCGCGCCGTTCTATGGTGGCGACGCACGCACCTGGCATGCACGGCATGGCGCGTTCTACAGCATGCGCCGCGAACCG
CGCATGCTATCGGCCCGCCAGCGCCGCGATGGCGCGCGGTCGAGTTATGTGGGCAGCGAAGTGTTCGTCAGCCTGGTCGA
TGCCGACGATCAGCCGCACAGCACGCGCCTGCGCCAGCTTGGGCTGCAACTGTGGTGCAGCAACCGCGATCTGCCGCTGC
ATATGCCGGTAGGCAAGGGCACCACCGATTTCACCATGGACAGCGGCGTGCCGGTCCAGAGCGTGCGCTGCGTGGCCGGG
CCGACCAAGCCGCGCCCGGCGTTGTCGGCTGGGCAGACTGCGTGGCGCCTGCTCAGCCAATTGCAGCTCAATTATCTCTC
GCTCTTCGAAGACGGCCCCGACGGCGCCGCTGCGCTACGCGAGATCCTCACCTTGTACTGCGACCCGTTCGACGCATCCG
CGCAGCGGCAGATCGAAGGCGTCAAGCAGGTGAGCGGCACACCGATCGTGCGGCGTATCCCGGTGCCTGGCCCGATCACC
TTCGGTCGCGGCCTGGAGATCACGCTGACCTGCGAGGACGCCGCCTTCGAAGGCACCGGCGCCTTCCTGCTGGCTTCGGT
GCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTCACCGAGACCGTGCTGCGCACCACCGAACGCAACGAGG
TGGCCCGATGGCCAGCCCAGCCCGGCACGCGCCCGCGCCTGTGA

Protein sequence :
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFTQHLLEMVY
PHYLAPLPSMAVVQLQPDLKDSGLAAGVVVPRQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLESPAALAAAGI
ALPAGRVVRAGVRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEMTLGADTVQM
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRAPLRRLHGSSFEVVVLLQRSLPSLAAAVGAEHFKLFCT
PAINLFPRRADRIHLHAGLHEYHVLADRTRPMDFEVHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHGAFYSMRREP
RMLSARQRRDGARSSYVGSEVFVSLVDADDQPHSTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVPVQSVRCVAG
PTKPRPALSAGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFDASAQRQIEGVKQVSGTPIVRRIPVPGPIT
FGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWPAQPGTRPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 8e-107 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XACM_4010 YP_004853544.1 hypothetical protein VFG2074 Protein 2e-158 56