Gene Information

Name : LIV_1083 (LIV_1083)
Accession : YP_004854857.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1137127 - 1137414 bp
Length : 288 bp
Strand : +
Note : Similar to Salmonella typhimurium PduA protein

DNA sequence : 
ATGCAAGAAGCACTAGGTCTAGTTGAAACTAAAGGACTAGTTGGCGCCATTGAAGCCGCTGACGCTATGGTTAAATCAGC
TAATGTCACACTAACTGGGTACGAAAAAATCGGATCCGGACTTGTCACTGTCATGGTTCGCGGGGATGTTGGTGCAGTTA
AAGCAGCAACAGAAGCAGGCGCGGTGGCGGCAAGGAATGTCGGCACGGTAATGAGTACACATGTTATTCCTCGTCCACAC
ACAGATGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Protein sequence : 
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAVAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-19 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1083 YP_004854857.1 putative propanediol utilization protein PduA VFG1596 Protein 1e-19 67
LIV_1083 YP_004854857.1 putative propanediol utilization protein PduA VFG1598 Protein 4e-18 64
LIV_1083 YP_004854857.1 putative propanediol utilization protein PduA VFG1597 Protein 7e-18 62