Gene Information

Name : LIV_1091 (LIV_1091)
Accession : YP_004854865.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative carboxysome structural protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1143811 - 1144086 bp
Length : 276 bp
Strand : +
Note : Similar to carboxysome structural protein

DNA sequence : 
ATGAATAATGCACTTGGAATGATCGAAACTAAAGGACTTGTTGGCGCAATTGAAGCAGCTGACGCAATGGTAAAAGCTGC
AAACGTATCACTTGTAGGTTATGAAAAAATCGGTTCTGGACTTGTAACAGTTATGGTACGCGGTGATGTTGGCGCAGTAA
AAGCAGCCACAGACGCAGGGGCAGCAGCAGCTCGTAATGTTGGAGAAGTACAATCTATCCATGTTATCCCTCGTCCTCAT
AACGATGTAGAAACATTGCTACCAAAAGGTCTGTAA

Protein sequence : 
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1091 YP_004854865.1 putative carboxysome structural protein VFG1596 Protein 1e-14 67
LIV_1091 YP_004854865.1 putative carboxysome structural protein VFG1598 Protein 7e-14 65
LIV_1091 YP_004854865.1 putative carboxysome structural protein VFG1597 Protein 7e-14 65