Gene Information

Name : LIV_1112 (LIV_1112)
Accession : YP_004854886.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative carboxysome structural protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1164379 - 1164663 bp
Length : 285 bp
Strand : +
Note : Similar to putative carboxysome structural protein

DNA sequence : 
ATGGCAAACGCAAACGCATTAGGTATGATCGAAACAAAAGGTTTAGTAGGAGCAGTAGAAGCAGCAGACGCAATGGTGAA
AGCAGCTAACGTAACACTTATGGGTAAAGAACAAGTTGGTGGCGGTCTAGTAACAGTTATGGTACGCGGTGATGTTGGCG
CAGTAAAAGCAGCAACAGATGCAGGCGCAGCAGCAGCAGAACGTGTTGGAGAATTACTATCTGTACACGTAATCCCACGT
CCACACAGCGAAGTAGATGCAATTCTACCAAAAAGCGCTGAATAA

Protein sequence : 
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPR
PHSEVDAILPKSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-09 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1112 YP_004854886.1 putative carboxysome structural protein VFG1596 Protein 6e-09 64
LIV_1112 YP_004854886.1 putative carboxysome structural protein VFG1597 Protein 4e-09 61
LIV_1112 YP_004854886.1 putative carboxysome structural protein VFG1598 Protein 8e-09 57