Gene Information

Name : LIV_1160 (LIV_1160)
Accession : YP_004854934.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1204845 - 1205546 bp
Length : 702 bp
Strand : +
Note : Similar to ABC transporter, ATP-binding proteins

DNA sequence : 
ATGACCTATGTAGAAATGAAAGATGTATCCAAATACTACGAAATGGGTGAAAACGTTGTCACAGCAAATGATAAAATAAC
TTTTGGCATAAAAAAAGGGGAATTAGTTATTATCGTTGGTCCTTCTGGTGCAGGTAAATCCACTGTACTAAATATTCTAG
GCGGAATGGACAACGCTAGTGAAGGGGAAATCATGGTGGATAACCAAGATATTGCTCAGTATAACGCCAAGCAATTAACT
AAATATCGGCGCACCGATGTTGGTTTTGTCTTTCAATTTTATAATTTAGTACCTAACTTAACCACCAAAGAAAACGTCGA
ATTAGCTGCTCAAATAGCGCCGAATGCATTAGATGCAGAAATGGTTTTAAAACAAGTCGGCTTAAGTCATCGATTAGATA
ATTTTCCAACACAACTTTCTGGTGGAGAACAACAACGAGTTGCTATTGCTAGAGCACTTGCTAAAGCACCTAAACTATTA
CTTTGCGATGAACCAACTGGCGCACTGGATTATGATACTGGGAAATCAGTATTAAAACTTCTACAGGAAACCTGCAAAAA
TACTGGTACAACGGTTATTATCATTACACATAATACGGCCATTACGCCCATCGCGGATCGAATTATCGAAGTTAATAATG
CAAAAGTTCGTAGTATCAAAGAAAATCCAGCGCCAATGTCTATTGACGACTTAGAATGGTAG

Protein sequence : 
MTYVEMKDVSKYYEMGENVVTANDKITFGIKKGELVIIVGPSGAGKSTVLNILGGMDNASEGEIMVDNQDIAQYNAKQLT
KYRRTDVGFVFQFYNLVPNLTTKENVELAAQIAPNALDAEMVLKQVGLSHRLDNFPTQLSGGEQQRVAIARALAKAPKLL
LCDEPTGALDYDTGKSVLKLLQETCKNTGTTVIIITHNTAITPIADRIIEVNNAKVRSIKENPAPMSIDDLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1160 YP_004854934.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-66 63
LIV_1160 YP_004854934.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-38 43
LIV_1160 YP_004854934.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 42