Gene Information

Name : RATSFB_0314 (RATSFB_0314)
Accession : YP_004856802.1
Strain : Candidatus Arthromitus sp. SFB-rat-Yit
Genome accession: NC_016012
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 376368 - 377072 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAAGATTGTTGAGTTTAAAGATGTTTCTAAACATTACAAGGTTGGAGAAATTACTATTGATGCACTTCATGATGT
TAATTTTTCTATAGATAAGGGTGAATTTGTTGTAATCCTTGGTGCGAGTGGGGCAGGTAAAACTACTATTTTAAATATTT
TAGGTGGAATGGATTTGGCATCTTCTGGAGAGGTTATTGTTGATGGTGAATATATTACTAATTTTAGTAAGAATCAATTA
ACAAAATATAGGAGAGAACAGATTGGATTTGTGTTTCAATTTTATAATTTAATACCAAATTTAACTGCCATTGAAAATGT
TGAATTTGCAACAAGTGTTTGTAAGGATTTTTTAGATGCTAAAGATATGTTAAATAGAGTTGGGTTATCTGAGAGAATAA
ATAATTTCCCAACACAGTTATCAGGTGGTGAACAGCAAAGGGTGGCGATTGCAAGAGCGATTGCAAAAAACCCATTACTT
CTTCTCTGTGATGAGCCTACGGGAGCACTTGATTATGATACGGGAAAGAAAGTTTTAAAACTCTTATATGAGATAAATCA
AACACTTAATAAGACGGTTGCTTTAATTACACATAATTCTTTAATAGCACCTATGGCTGATAAAGTTATACACGTTAAAA
ATGGAACTATAGAACGTATAGAATTTAACGAAAATAAGGTTCCTGTTGAGGAGATTGAGTGGTAG

Protein sequence : 
MSKIVEFKDVSKHYKVGEITIDALHDVNFSIDKGEFVVILGASGAGKTTILNILGGMDLASSGEVIVDGEYITNFSKNQL
TKYRREQIGFVFQFYNLIPNLTAIENVEFATSVCKDFLDAKDMLNRVGLSERINNFPTQLSGGEQQRVAIARAIAKNPLL
LLCDEPTGALDYDTGKKVLKLLYEINQTLNKTVALITHNSLIAPMADKVIHVKNGTIERIEFNENKVPVEEIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-31 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RATSFB_0314 YP_004856802.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-60 55
RATSFB_0314 YP_004856802.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-42 43
RATSFB_0314 YP_004856802.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-38 41