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Name : secD (GNIT_1012) Accession : YP_004871142.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1103818 - 1105665 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAATAAAACTCCATTTTGGAAATATATTTTAGTCATATTTGTTGTTGGTATAACAGCTTTGTATGCAATGCCGAA TATTTATGGTGAAGATCACGCTATTCAGATTTCGGCAAGTAATAATGCCACTGTTAGTGAAGAGTTAAAAACCTCGATAG AGCGCTCTTTGAAAGATAAAGGCATCGAGATTAAAGGTATTGAGCTCGAGAACGAACGCATACTAGTACGTTTGCTTGAT TCTGACACTCAGTTGGTGGCTAGAGAGTTGATTGATAGTACGCTTGATAACGATGACTTCGTTGTTGCTATGAACTTAGC ACCAGACACACCGGATTGGCTAGAAGCGTTTGGCGCAAACCCAATGAAGCTGGGTCTTGATTTGCGCGGTGGTGTTCACT TTCTAATGGAAGTTGACATGAACAGCGCAACGACAAAAGCATACGAAGATGTTGTTGGTGATTTCAAACTACAACTTCGA GAAGAAAGAATATTTTACCGTACCGTTGTGCAAAACGCTGACTCCGTAGACGTTATCTTTAGGGACGCTGATATGCTTGA GAAAGCGCAGTTTTATTTGCGCAATCAGTTTGGCAATTTGAGCATTACTGAACGTGACGACCTGACACTACGAGCGACAT TTTTGGAAGCTCGCCTGGCAGAAATACGTGACGCGGCTGTCAAACAAAACGTAACCATTATTCGCAGCAGAATAAATCAG CTCGGTGTTGCCGAGCCTCTGGTTCAGAAGCAAGGACAAGAGCGTATTGTCGTACAGTTGCCTGGTATTCAAGATACCGC TAAGGCAAAAGAAATTCTCAATGCGACAGCCACACTTGAGTTTCGCATGCTGGATGAAAAAAATGATGTGCGTGACGCAA TGCGTGGAAGAGCTCCCGCAGGGTCAGAAGTTATCTATCATAAGAATGGTCAGCCTTATTTGTTGAAAAAGCAGATTATG CTAACTGGTTCGCACATTATCGATGCTAACAGCGGCGTTGACCAATACGGTGTGCCTAACGTGAGCATTGACCTTGATTC AAAAGGCGGAGCGAAGTGGTCGAAGGCTACGAAAGAAAATATCAAAAAGCCAATGGCAACGGTATTTATCGAATACAAAA CAACCGGCGAGCGTGATGTAAACGGCAAGCTTGTGTTTGAAAAGAAAGAAGAGATTATTAGCGTCGCGACTATTCAAGGG CAATTAGGTTCTTCATTCCAAATCACTGGGCTAGATTCTCCAACAGAAGCAAGAGAGTTATCATTGCTGCTAAGAGCTGG TGCGTTGATTGCACCCATTCAAATAGTTGAAGAACGCACGGTTGGACCAAGTTTAGGTAAAGAAAATATCGAATTAGGCA TGACTGCTATTATCTGGGGCTTGGCCGCGGTGTTAGTATTTATGCTGATTTATTATCGTGCTTTTGGGGTTATTGCGAAT ATTGCGCTAGTGCTTAACCTAGTCATGATTATCGGTATTATGTCGATGATCCCAGGTGCGACCTTAACGCTTCCAGGTAT GGCCGGTATTGTTCTTACAGTGGGTATGGCAGTAGATGCGAACGTACTCATATTCGAAAGGATTAGAGAGGAATTGCGTG ATGGTCGAAGTCCGCAGCAGTCCATCCACTTTGGCTATGACAGCGCATTCTCGACTATCTTGGATGCCAACATAACTACC TTCATTGCCGGTTTGATTCTGTTTGCCGTCGGCACCGGTCCCATTAAAGGGTTCTCAATTACGTTGATGATAGGTATCGC TACATCAATGTTCACTGCGATTATTGTCACTCGTGTGCTGGTTAACAGCATATGGGGCGGTAGACGTGTGACTAAGTTAT CGATATAG Protein sequence : MLNKTPFWKYILVIFVVGITALYAMPNIYGEDHAIQISASNNATVSEELKTSIERSLKDKGIEIKGIELENERILVRLLD SDTQLVARELIDSTLDNDDFVVAMNLAPDTPDWLEAFGANPMKLGLDLRGGVHFLMEVDMNSATTKAYEDVVGDFKLQLR EERIFYRTVVQNADSVDVIFRDADMLEKAQFYLRNQFGNLSITERDDLTLRATFLEARLAEIRDAAVKQNVTIIRSRINQ LGVAEPLVQKQGQERIVVQLPGIQDTAKAKEILNATATLEFRMLDEKNDVRDAMRGRAPAGSEVIYHKNGQPYLLKKQIM LTGSHIIDANSGVDQYGVPNVSIDLDSKGGAKWSKATKENIKKPMATVFIEYKTTGERDVNGKLVFEKKEEIISVATIQG QLGSSFQITGLDSPTEARELSLLLRAGALIAPIQIVEERTVGPSLGKENIELGMTAIIWGLAAVLVFMLIYYRAFGVIAN IALVLNLVMIIGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIFERIREELRDGRSPQQSIHFGYDSAFSTILDANITT FIAGLILFAVGTGPIKGFSITLMIGIATSMFTAIIVTRVLVNSIWGGRRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-121 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-122 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 48 |
